Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AC019322.1-201ENST00000571869 389 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 OR7E19P-202ENST00000589942 844 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 GNL2P1-201ENST00000451274 2190 ntBASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC71LQ8N9Z2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AC217777.1-201ENST00000570034 1471 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AC119674.1-202ENST00000641333 1860 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AC007938.2-201ENST00000604666 2634 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AC117409.1-201ENST00000470499 1310 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AC011933.2-201ENST00000578539 2790 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 PRELID1P1-201ENST00000403549 660 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AL589994.1-201ENST00000404962 340 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 RPS4XP5-201ENST00000419038 768 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 NFYAP1-201ENST00000431953 972 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AL158214.1-201ENST00000444423 404 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AL591623.2-201ENST00000449978 222 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 SLAMF6P1-201ENST00000451067 602 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AC002553.2-201ENST00000453217 340 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AC004129.2-201ENST00000457229 287 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AP002371.1-201ENST00000463604 433 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 MORF4L2P1-201ENST00000503761 858 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 MTCO3P42-201ENST00000509488 518 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 MTCO3P39-201ENST00000514812 518 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 OR4A17P-201ENST00000526032 904 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 GARSP1-201ENST00000570895 719 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AL589765.6-201ENST00000601909 549 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AC023206.1-201ENST00000605824 298 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AL139099.4-201ENST00000614802 114 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 MIR6849-201ENST00000618543 69 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AC021766.1-201ENST00000624404 741 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 AC073488.6-201ENST00000632293 754 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 MFSD8-239ENST00000641590 2479 ntBASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
CCDC71LQ8N9Z2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms