Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 MTHFD2P5-201ENST00000320415 844 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 RNA5SP46-201ENST00000362370 120 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 SNORA64.1-201ENST00000362600 132 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 U3.7-201ENST00000363668 216 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 RNU4-34P-201ENST00000410431 124 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 DPPA2P3-201ENST00000411853 655 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 OR2AT2P-201ENST00000413438 905 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 RAB9AP4-201ENST00000415230 609 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 GAPDHP58-201ENST00000438477 1006 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 AC089999.1-201ENST00000460336 374 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 OR9N1P-201ENST00000491296 333 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 AC108693.1-201ENST00000496068 432 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 NPM1P27-201ENST00000502784 830 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 SNORA26.10-201ENST00000516427 141 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 AC104997.1-201ENST00000519761 717 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 AC015802.2-201ENST00000589690 189 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 AC118658.2-201ENST00000618697 459 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AC022417.1-201ENST00000624768 1303 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 RN7SKP128-201ENST00000364270 303 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 RNA5SP500-201ENST00000364486 119 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AC106901.1-201ENST00000425086 698 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AC016027.4-201ENST00000450866 277 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AL133445.1-201ENST00000467051 452 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 PFN1P6-201ENST00000476786 399 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 RN7SL57P-201ENST00000493687 290 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AC138866.2-201ENST00000508650 584 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 SUMO2P19-201ENST00000518920 295 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 IGHV1-14-201ENST00000523391 241 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 MIR1269B-201ENST00000580405 75 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AC011497.2-201ENST00000600255 639 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AL445670.1-201ENST00000618889 801 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AC004808.2-201ENST00000627965 773 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AC119674.1-220ENST00000641502 1048 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 OR7A1P-202ENST00000641542 1158 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 AC005261.6-201ENST00000623072 1387 ntBASIC6.55□□□□□ -1.36
HERC6Q8IVU3 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
HERC6Q8IVU3 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 198.1 ms