Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC8.2□□□□□ -1.1
USP31Q70CQ4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC8.2□□□□□ -1.1
USP31Q70CQ4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC8.2□□□□□ -1.1
USP31Q70CQ4 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC8.2□□□□□ -1.1
USP31Q70CQ4 AC023824.3-201ENST00000569003 562 ntBASIC8.2□□□□□ -1.1
USP31Q70CQ4 SNORD95-201ENST00000579879 68 ntBASIC8.2□□□□□ -1.1
USP31Q70CQ4 MIR4443-201ENST00000585052 53 ntBASIC8.2□□□□□ -1.1
USP31Q70CQ4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC8.2□□□□□ -1.1
USP31Q70CQ4 AC119403.2-201ENST00000590960 598 ntBASIC8.2□□□□□ -1.1
USP31Q70CQ4 AC013444.2-201ENST00000603317 787 ntBASIC8.2□□□□□ -1.1
USP31Q70CQ4 AC002487.1-201ENST00000604565 994 ntBASIC8.2□□□□□ -1.1
USP31Q70CQ4 AC021851.1-201ENST00000608537 1082 ntBASIC8.2□□□□□ -1.1
USP31Q70CQ4 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
USP31Q70CQ4 U6.48-201ENST00000618523 106 ntBASIC8.2□□□□□ -1.1
USP31Q70CQ4 AC006386.1-201ENST00000619436 415 ntBASIC8.2□□□□□ -1.1
USP31Q70CQ4 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC8.2□□□□□ -1.1
USP31Q70CQ4 AP003399.1-201ENST00000637534 361 ntBASIC8.2□□□□□ -1.1
USP31Q70CQ4 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
USP31Q70CQ4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC8.2□□□□□ -1.1
USP31Q70CQ4 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
USP31Q70CQ4 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
USP31Q70CQ4 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
USP31Q70CQ4 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
USP31Q70CQ4 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 HLF-210ENST00000575345 3589 ntTSL 2 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
USP31Q70CQ4 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC8.19□□□□□ -1.1
USP31Q70CQ4 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
USP31Q70CQ4 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
USP31Q70CQ4 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 SELENOWP1-201ENST00000322792 252 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
USP31Q70CQ4 FAM32BP-201ENST00000344033 333 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 MIR375-201ENST00000362103 64 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 HMGB3P19-201ENST00000403971 560 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 AC016739.1-201ENST00000405359 345 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 ZSCAN12P1-201ENST00000406489 419 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
USP31Q70CQ4 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 AC092447.2-201ENST00000435487 669 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
USP31Q70CQ4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 AC016687.1-201ENST00000482574 353 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 AC004923.2-201ENST00000529649 369 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 AGGF1P9-201ENST00000561884 913 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 AC010547.7-201ENST00000570323 333 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 AC245036.5-201ENST00000596330 847 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 RN7SL787P-201ENST00000613000 284 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 AP002967.1-201ENST00000624203 539 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 AC018659.2-201ENST00000624690 715 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 OR5AC4P-202ENST00000642086 985 ntBASIC8.19□□□□□ -1.1
USP31Q70CQ4 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
USP31Q70CQ4 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
USP31Q70CQ4 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC8.19□□□□□ -1.1
USP31Q70CQ4 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC8.18□□□□□ -1.1
USP31Q70CQ4 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC8.18□□□□□ -1.1
USP31Q70CQ4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
USP31Q70CQ4 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
USP31Q70CQ4 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USP31Q70CQ4 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC8.18□□□□□ -1.1
USP31Q70CQ4 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
USP31Q70CQ4 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
USP31Q70CQ4 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USP31Q70CQ4 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
USP31Q70CQ4 AC234772.1-201ENST00000377927 937 ntBASIC8.18□□□□□ -1.1
USP31Q70CQ4 RNU6-354P-201ENST00000383862 107 ntBASIC8.18□□□□□ -1.1
USP31Q70CQ4 RNU6-610P-201ENST00000384264 107 ntBASIC8.18□□□□□ -1.1
USP31Q70CQ4 MIR143-201ENST00000385300 106 ntBASIC8.18□□□□□ -1.1
USP31Q70CQ4 CAV1-204ENST00000393470 598 ntTSL 4 BASIC8.18□□□□□ -1.1
USP31Q70CQ4 UBE2V1P9-201ENST00000414760 368 ntBASIC8.18□□□□□ -1.1
USP31Q70CQ4 AC127526.2-201ENST00000426436 775 ntBASIC8.18□□□□□ -1.1
USP31Q70CQ4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC8.18□□□□□ -1.1
USP31Q70CQ4 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC8.18□□□□□ -1.1
USP31Q70CQ4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms