Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 AC103987.1-201ENST00000473394 348 ntBASIC4.43□□□□□ -1.7
VPS13CQ709C8 MIR4429-201ENST00000580105 73 ntBASIC4.43□□□□□ -1.7
VPS13CQ709C8 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 SH3GLB1-201ENST00000370558 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 DAPK2-213ENST00000612884 8086 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 THSD7B-203ENST00000413152 5846 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 AL049693.1-201ENST00000402760 611 ntBASIC4.43□□□□□ -1.7
VPS13CQ709C8 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 RPL18P10-201ENST00000425606 538 ntBASIC4.43□□□□□ -1.7
VPS13CQ709C8 AC004975.1-201ENST00000428733 208 ntBASIC4.43□□□□□ -1.7
VPS13CQ709C8 AC068287.1-201ENST00000430283 295 ntBASIC4.43□□□□□ -1.7
VPS13CQ709C8 TRY2P-201ENST00000448860 689 ntBASIC4.43□□□□□ -1.7
VPS13CQ709C8 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 OR5AM1P-201ENST00000532136 1032 ntBASIC4.43□□□□□ -1.7
VPS13CQ709C8 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 AC092653.1-201ENST00000608509 531 ntBASIC4.43□□□□□ -1.7
VPS13CQ709C8 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 NXF4-202ENST00000416098 1465 ntBASIC4.43□□□□□ -1.7
VPS13CQ709C8 CAST-202ENST00000325674 3356 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 RPL21P129-201ENST00000491732 478 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 MIR4691-201ENST00000583764 85 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 AL359757.1-201ENST00000623176 255 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 THAP12P4-201ENST00000528321 2266 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 BX284613.1-201ENST00000452221 1641 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 LINC01963-201ENST00000562038 3148 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 RN7SKP149-201ENST00000363008 344 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 GAPDHP25-201ENST00000447061 1001 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 RPS17P5-201ENST00000498293 408 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 MORF4L1P3-201ENST00000525966 950 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 AC137627.1-201ENST00000545761 289 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 KIAA0355-201ENST00000299505 6717 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 ADD2-201ENST00000264436 9267 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 SAMM50P1-201ENST00000455403 1399 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 NWD1-205ENST00000549814 6614 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 CNOT7P1-201ENST00000429006 852 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 AC093414.1-201ENST00000434712 514 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 CYCSP42-201ENST00000450823 238 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 OSTCP1-201ENST00000455507 450 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 AC140172.1-201ENST00000502928 141 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 AC009117.1-201ENST00000563948 554 ntBASIC4.42□□□□□ -1.7
VPS13CQ709C8 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms