Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RPL31P1-201ENST00000398116 372 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 RN7SKP261-201ENST00000410948 278 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 GSTA10P-201ENST00000412182 576 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 RPL12P10-201ENST00000413498 498 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AL773545.3-201ENST00000414297 706 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AL354751.2-201ENST00000415471 210 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 EIF4A1P1-201ENST00000420241 934 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 GRPEL2P2-201ENST00000421856 670 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC009303.1-201ENST00000426307 352 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 GAPDHP51-201ENST00000426454 1000 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC009784.1-201ENST00000426484 460 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 ARL2BPP7-201ENST00000446421 490 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC092421.1-201ENST00000448148 418 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 RPL5P24-201ENST00000463742 885 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 RPSAP37-201ENST00000470913 821 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC104971.1-201ENST00000495117 578 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AL358832.1-201ENST00000497800 389 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 HMGN1P12-201ENST00000499125 195 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 RNF138P1-201ENST00000502765 546 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC114967.1-201ENST00000504890 259 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC008629.3-201ENST00000505786 586 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AP005597.2-201ENST00000526238 341 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AL360085.1-201ENST00000604713 532 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC009033.1-201ENST00000624279 431 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC025048.6-202ENST00000627667 438 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 WBP11P1-201ENST00000562560 1931 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 RNA5SP355-201ENST00000365317 135 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 RNU6-1227P-201ENST00000383981 107 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 CCNG1P1-201ENST00000406783 885 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 VN1R36P-201ENST00000414936 291 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 RAC1P4-201ENST00000419413 579 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 PNRC2P1-201ENST00000423940 420 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 HSPD1P12-201ENST00000429127 1069 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC073072.2-201ENST00000447425 348 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 RPS29P5-201ENST00000452777 171 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms