Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 OR4F13P-202ENST00000560066 2054 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFX4Q33E94 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFX4Q33E94 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RFX4Q33E94 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.33□□□□□ -1.56
RFX4Q33E94 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFX4Q33E94 RNA5SP110-201ENST00000362638 115 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
RFX4Q33E94 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.33□□□□□ -1.56
RFX4Q33E94 SNRPEP6-201ENST00000407465 277 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 RN7SKP108-201ENST00000411367 328 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.33□□□□□ -1.56
RFX4Q33E94 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.33□□□□□ -1.56
RFX4Q33E94 RPSAP65-201ENST00000429660 595 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 AL445928.1-201ENST00000435545 222 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 LINC00328-2P-201ENST00000436585 219 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 AC092106.1-201ENST00000444291 373 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 RPS7P6-201ENST00000485777 579 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 GOLGA5P1-201ENST00000507317 980 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.33□□□□□ -1.56
RFX4Q33E94 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.33□□□□□ -1.56
RFX4Q33E94 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.33□□□□□ -1.56
RFX4Q33E94 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.33□□□□□ -1.56
RFX4Q33E94 NMNAT1P5-201ENST00000559657 841 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.33□□□□□ -1.56
RFX4Q33E94 FAM72A-208ENST00000607379 1139 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 AC012676.3-201ENST00000614983 479 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 MIR6823-201ENST00000622118 61 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.33□□□□□ -1.56
RFX4Q33E94 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFX4Q33E94 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RFX4Q33E94 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.33□□□□□ -1.56
RFX4Q33E94 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFX4Q33E94 MRRFP1-201ENST00000435941 1675 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RFX4Q33E94 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RFX4Q33E94 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.33□□□□□ -1.56
RFX4Q33E94 MTCO1P28-201ENST00000574177 1528 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFX4Q33E94 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFX4Q33E94 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFX4Q33E94 AC020633.1-201ENST00000468439 2247 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.32□□□□□ -1.56
RFX4Q33E94 AL022322.2-201ENST00000624072 20397 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RFX4Q33E94 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFX4Q33E94 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFX4Q33E94 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFX4Q33E94 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFX4Q33E94 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFX4Q33E94 AL121886.1-201ENST00000358609 435 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 RN7SKP184-201ENST00000362348 333 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFX4Q33E94 MIR188-201ENST00000385034 86 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 RPS4XP5-201ENST00000419038 768 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 Z82198.3-201ENST00000421145 199 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 AC099782.1-201ENST00000425889 474 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 MGAT2P2-201ENST00000427194 797 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 PCBP2P1-201ENST00000437262 977 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 RPS12P17-201ENST00000438591 377 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.32□□□□□ -1.56
RFX4Q33E94 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.32□□□□□ -1.56
RFX4Q33E94 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.32□□□□□ -1.56
RFX4Q33E94 AC008629.2-201ENST00000503783 483 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.32□□□□□ -1.56
RFX4Q33E94 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.32□□□□□ -1.56
RFX4Q33E94 TXNP4-201ENST00000575018 310 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.32□□□□□ -1.56
RFX4Q33E94 MIR4701-201ENST00000583094 63 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.32□□□□□ -1.56
RFX4Q33E94 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.32□□□□□ -1.56
RFX4Q33E94 WBP1LP12-201ENST00000604449 331 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 AC145423.1-201ENST00000605712 336 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.32□□□□□ -1.56
RFX4Q33E94 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.32□□□□□ -1.56
RFX4Q33E94 AC073488.3-201ENST00000631611 778 ntBASIC5.32□□□□□ -1.56
RFX4Q33E94 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.32□□□□□ -1.56
RFX4Q33E94 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFX4Q33E94 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFX4Q33E94 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RFX4Q33E94 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFX4Q33E94 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFX4Q33E94 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RFX4Q33E94 RBPJP7-201ENST00000442803 1447 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 RBPJP5-201ENST00000449433 1447 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFX4Q33E94 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFX4Q33E94 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.31□□□□□ -1.56
RFX4Q33E94 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFX4Q33E94 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
RFX4Q33E94 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFX4Q33E94 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.31□□□□□ -1.56
RFX4Q33E94 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
RFX4Q33E94 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFX4Q33E94 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFX4Q33E94 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.31□□□□□ -1.56
RFX4Q33E94 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFX4Q33E94 RNU6-673P-201ENST00000365084 104 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RFX4Q33E94 AL034417.1-201ENST00000399343 800 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms