Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.28□□□□□ -1.24
SOX4Q06945 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.27□□□□□ -1.24
SOX4Q06945 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
SOX4Q06945 HYDIN2-203ENST00000614586 13885 ntBASIC7.27□□□□□ -1.24
SOX4Q06945 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.27□□□□□ -1.25
SOX4Q06945 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX4Q06945 AC009237.3-203ENST00000442128 3551 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.27□□□□□ -1.25
SOX4Q06945 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
SOX4Q06945 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC7.27□□□□□ -1.25
SOX4Q06945 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX4Q06945 RNU6-157P-201ENST00000383957 107 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 AL359694.1-201ENST00000403247 604 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 RN7SKP271-201ENST00000410528 320 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 RPS7P9-201ENST00000414704 586 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 AL513325.1-201ENST00000417716 1034 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX4Q06945 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.27□□□□□ -1.25
SOX4Q06945 ZNF863P-201ENST00000426746 417 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX4Q06945 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SOX4Q06945 AC009263.1-201ENST00000441193 1239 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX4Q06945 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC7.27□□□□□ -1.25
SOX4Q06945 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
SOX4Q06945 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX4Q06945 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC7.27□□□□□ -1.25
SOX4Q06945 RPL26P30-201ENST00000453533 435 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 CCNB1IP1P3-201ENST00000454702 829 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 RN7SL393P-201ENST00000463588 296 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.27□□□□□ -1.25
SOX4Q06945 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SOX4Q06945 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SOX4Q06945 DSTNP2-201ENST00000504533 515 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SOX4Q06945 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
SOX4Q06945 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX4Q06945 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX4Q06945 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX4Q06945 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX4Q06945 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.27□□□□□ -1.25
SOX4Q06945 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.27□□□□□ -1.25
SOX4Q06945 AC010198.2-201ENST00000550612 259 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.27□□□□□ -1.25
SOX4Q06945 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX4Q06945 NBEAP1-201ENST00000554452 979 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 OR11H3P-201ENST00000554547 982 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 AL445383.1-201ENST00000554689 874 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC7.27□□□□□ -1.25
SOX4Q06945 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX4Q06945 MIR4732-201ENST00000581873 76 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.27□□□□□ -1.25
SOX4Q06945 AC022146.1-201ENST00000595307 847 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 AL583832.1-201ENST00000603227 784 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 AC021749.1-201ENST00000604322 607 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.27□□□□□ -1.25
SOX4Q06945 AC025253.1-201ENST00000613623 543 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 AC026951.2-201ENST00000613847 241 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 AC126175.1-201ENST00000617041 758 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 OR1S1-201ENST00000624470 978 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC7.27□□□□□ -1.25
SOX4Q06945 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.27□□□□□ -1.25
SOX4Q06945 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.27□□□□□ -1.25
SOX4Q06945 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX4Q06945 AL132640.2-201ENST00000559968 1698 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX4Q06945 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SOX4Q06945 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.27□□□□□ -1.25
SOX4Q06945 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
SOX4Q06945 AP000641.1-201ENST00000531988 1639 ntBASIC7.27□□□□□ -1.25
SOX4Q06945 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
SOX4Q06945 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
SOX4Q06945 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.26□□□□□ -1.25
SOX4Q06945 CCDC162P-202ENST00000368966 6751 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
SOX4Q06945 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.26□□□□□ -1.25
SOX4Q06945 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 AC007382.1-201ENST00000624376 2618 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 RNA5SP321-201ENST00000362722 111 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC7.26□□□□□ -1.25
SOX4Q06945 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.26□□□□□ -1.25
SOX4Q06945 RN7SKP188-201ENST00000410789 317 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 BTF3P8-201ENST00000414577 526 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 EIF1P1-201ENST00000421436 341 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.26□□□□□ -1.25
SOX4Q06945 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC7.26□□□□□ -1.25
SOX4Q06945 AL596276.1-201ENST00000434465 418 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms