Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.18□□□□□ -1.58
H3F3AP84243 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.18□□□□□ -1.58
H3F3AP84243 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.18□□□□□ -1.58
H3F3AP84243 AP006222.1-205ENST00000450734 457 ntBASIC5.18□□□□□ -1.58
H3F3AP84243 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.18□□□□□ -1.58
H3F3AP84243 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3AP84243 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3AP84243 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.18□□□□□ -1.58
H3F3AP84243 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.18□□□□□ -1.58
H3F3AP84243 AC105384.2-201ENST00000508433 640 ntBASIC5.18□□□□□ -1.58
H3F3AP84243 AC074255.1-201ENST00000511259 501 ntBASIC5.18□□□□□ -1.58
H3F3AP84243 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.18□□□□□ -1.58
H3F3AP84243 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.18□□□□□ -1.58
H3F3AP84243 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
H3F3AP84243 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.18□□□□□ -1.58
H3F3AP84243 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.18□□□□□ -1.58
H3F3AP84243 ZNF322P1-201ENST00000568013 1209 ntBASIC5.18□□□□□ -1.58
H3F3AP84243 MIR4260-201ENST00000583107 67 ntBASIC5.18□□□□□ -1.58
H3F3AP84243 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3AP84243 AC241377.1-201ENST00000619797 406 ntBASIC5.18□□□□□ -1.58
H3F3AP84243 AC022400.9-201ENST00000623633 273 ntBASIC5.18□□□□□ -1.58
H3F3AP84243 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3AP84243 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.18□□□□□ -1.58
H3F3AP84243 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3AP84243 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3AP84243 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
H3F3AP84243 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
H3F3AP84243 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.18□□□□□ -1.58
H3F3AP84243 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.18□□□□□ -1.58
H3F3AP84243 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.18□□□□□ -1.58
H3F3AP84243 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3AP84243 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3AP84243 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3AP84243 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3AP84243 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
H3F3AP84243 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3AP84243 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3AP84243 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3AP84243 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3AP84243 AC023490.2-201ENST00000359859 470 ntBASIC5.17□□□□□ -1.58
H3F3AP84243 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
H3F3AP84243 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
H3F3AP84243 RAB5CP1-201ENST00000395972 580 ntBASIC5.17□□□□□ -1.58
H3F3AP84243 LYPLA1P3-201ENST00000402650 695 ntBASIC5.17□□□□□ -1.58
H3F3AP84243 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.17□□□□□ -1.58
H3F3AP84243 VN1R21P-201ENST00000426703 765 ntBASIC5.17□□□□□ -1.58
H3F3AP84243 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.17□□□□□ -1.58
H3F3AP84243 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.17□□□□□ -1.58
H3F3AP84243 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.17□□□□□ -1.58
H3F3AP84243 AC094085.1-201ENST00000468914 584 ntBASIC5.17□□□□□ -1.58
H3F3AP84243 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3AP84243 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.17□□□□□ -1.58
H3F3AP84243 AC026782.2-201ENST00000510845 636 ntBASIC5.17□□□□□ -1.58
H3F3AP84243 AC006499.4-201ENST00000510947 694 ntBASIC5.17□□□□□ -1.58
H3F3AP84243 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.17□□□□□ -1.58
H3F3AP84243 AC139365.2-201ENST00000517972 253 ntBASIC5.17□□□□□ -1.58
H3F3AP84243 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.17□□□□□ -1.58
H3F3AP84243 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.17□□□□□ -1.58
H3F3AP84243 HMGN2P47-201ENST00000559378 272 ntBASIC5.17□□□□□ -1.58
H3F3AP84243 AC096996.1-201ENST00000563813 325 ntBASIC5.17□□□□□ -1.58
H3F3AP84243 NDUFA5P11-201ENST00000567995 343 ntBASIC5.17□□□□□ -1.58
H3F3AP84243 AC092121.1-201ENST00000569452 202 ntBASIC5.17□□□□□ -1.58
H3F3AP84243 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.17□□□□□ -1.58
H3F3AP84243 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3AP84243 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3AP84243 FAM27E4-201ENST00000605259 342 ntBASIC5.17□□□□□ -1.58
H3F3AP84243 AL133481.2-203ENST00000607558 139 ntBASIC5.17□□□□□ -1.58
H3F3AP84243 AC000095.2-202ENST00000637415 154 ntBASIC5.17□□□□□ -1.58
H3F3AP84243 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.17□□□□□ -1.58
H3F3AP84243 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.17□□□□□ -1.58
H3F3AP84243 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.17□□□□□ -1.58
H3F3AP84243 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.17□□□□□ -1.58
H3F3AP84243 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3AP84243 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3AP84243 AL022311.1-201ENST00000623726 19416 ntBASIC5.17□□□□□ -1.58
H3F3AP84243 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
H3F3AP84243 AP004607.3-201ENST00000530354 3915 ntBASIC5.16□□□□□ -1.58
H3F3AP84243 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.16□□□□□ -1.58
H3F3AP84243 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.16□□□□□ -1.58
H3F3AP84243 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
H3F3AP84243 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
H3F3AP84243 AL158152.1-201ENST00000602652 1435 ntBASIC5.16□□□□□ -1.58
H3F3AP84243 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
H3F3AP84243 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.16□□□□□ -1.58
H3F3AP84243 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
H3F3AP84243 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
H3F3AP84243 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.16□□□□□ -1.58
H3F3AP84243 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.16□□□□□ -1.58
H3F3AP84243 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.16□□□□□ -1.58
H3F3AP84243 AL357752.1-201ENST00000412817 349 ntBASIC5.16□□□□□ -1.58
H3F3AP84243 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
H3F3AP84243 AL138899.2-201ENST00000439139 499 ntBASIC5.16□□□□□ -1.58
H3F3AP84243 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.16□□□□□ -1.58
H3F3AP84243 RPS10P18-201ENST00000442662 495 ntBASIC5.16□□□□□ -1.58
H3F3AP84243 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.16□□□□□ -1.58
H3F3AP84243 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.16□□□□□ -1.58
H3F3AP84243 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.16□□□□□ -1.58
H3F3AP84243 RN7SL570P-201ENST00000484405 292 ntBASIC5.16□□□□□ -1.58
H3F3AP84243 NENFP3-201ENST00000503735 313 ntBASIC5.16□□□□□ -1.58
H3F3AP84243 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms