Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
YBX1P67809 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
YBX1P67809 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.58□□□□□ -1.36
YBX1P67809 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
YBX1P67809 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
YBX1P67809 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
YBX1P67809 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
YBX1P67809 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.58□□□□□ -1.36
YBX1P67809 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
YBX1P67809 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
YBX1P67809 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
YBX1P67809 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
YBX1P67809 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
YBX1P67809 FAM133CP-201ENST00000332869 704 ntBASIC6.58□□□□□ -1.36
YBX1P67809 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
YBX1P67809 RNU6-694P-201ENST00000364071 147 ntBASIC6.58□□□□□ -1.36
YBX1P67809 RN7SKP130-201ENST00000364924 301 ntBASIC6.58□□□□□ -1.36
YBX1P67809 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.58□□□□□ -1.36
YBX1P67809 RNU6-224P-201ENST00000384055 107 ntBASIC6.58□□□□□ -1.36
YBX1P67809 RN7SKP91-201ENST00000410852 288 ntBASIC6.58□□□□□ -1.36
YBX1P67809 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.58□□□□□ -1.36
YBX1P67809 AC016831.2-201ENST00000417179 352 ntBASIC6.58□□□□□ -1.36
YBX1P67809 RPL24P2-201ENST00000421023 475 ntBASIC6.58□□□□□ -1.36
YBX1P67809 AC019178.2-201ENST00000423595 505 ntBASIC6.58□□□□□ -1.36
YBX1P67809 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.58□□□□□ -1.36
YBX1P67809 PUDPP2-201ENST00000431423 643 ntBASIC6.58□□□□□ -1.36
YBX1P67809 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.58□□□□□ -1.36
YBX1P67809 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
YBX1P67809 AC011742.2-201ENST00000443818 352 ntBASIC6.58□□□□□ -1.36
YBX1P67809 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.58□□□□□ -1.36
YBX1P67809 MRPL42P4-201ENST00000453267 443 ntBASIC6.58□□□□□ -1.36
YBX1P67809 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.58□□□□□ -1.36
YBX1P67809 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.58□□□□□ -1.36
YBX1P67809 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.58□□□□□ -1.36
YBX1P67809 AC093890.1-201ENST00000502554 540 ntBASIC6.58□□□□□ -1.36
YBX1P67809 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
YBX1P67809 RNU6-1178P-201ENST00000516674 107 ntBASIC6.58□□□□□ -1.36
YBX1P67809 AC113191.1-201ENST00000517759 403 ntBASIC6.58□□□□□ -1.36
YBX1P67809 IGKV2D-38-201ENST00000518423 240 ntBASIC6.58□□□□□ -1.36
YBX1P67809 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.58□□□□□ -1.36
YBX1P67809 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
YBX1P67809 OR5AM1P-201ENST00000532136 1032 ntBASIC6.58□□□□□ -1.36
YBX1P67809 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.58□□□□□ -1.36
YBX1P67809 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
YBX1P67809 AP000619.2-201ENST00000546014 969 ntBASIC6.58□□□□□ -1.36
YBX1P67809 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.58□□□□□ -1.36
YBX1P67809 AC087897.1-201ENST00000550134 156 ntBASIC6.58□□□□□ -1.36
YBX1P67809 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.58□□□□□ -1.36
YBX1P67809 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
YBX1P67809 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.58□□□□□ -1.36
YBX1P67809 AC090695.1-201ENST00000561269 1222 ntBASIC6.58□□□□□ -1.36
YBX1P67809 AC026458.1-201ENST00000564330 438 ntBASIC6.58□□□□□ -1.36
YBX1P67809 AC006362.1-201ENST00000567392 174 ntBASIC6.58□□□□□ -1.36
YBX1P67809 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.58□□□□□ -1.36
YBX1P67809 MIR4719-201ENST00000585233 84 ntBASIC6.58□□□□□ -1.36
YBX1P67809 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.58□□□□□ -1.36
YBX1P67809 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.58□□□□□ -1.36
YBX1P67809 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.58□□□□□ -1.36
YBX1P67809 AC017083.3-201ENST00000609955 700 ntBASIC6.58□□□□□ -1.36
YBX1P67809 AL137000.1-201ENST00000610528 1244 ntBASIC6.58□□□□□ -1.36
YBX1P67809 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.58□□□□□ -1.36
YBX1P67809 MRPL57P3-201ENST00000619218 176 ntBASIC6.58□□□□□ -1.36
YBX1P67809 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
YBX1P67809 AC120057.5-201ENST00000623840 154 ntBASIC6.58□□□□□ -1.36
YBX1P67809 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
YBX1P67809 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.58□□□□□ -1.36
YBX1P67809 OR8G3P-202ENST00000641572 1255 ntBASIC6.58□□□□□ -1.36
YBX1P67809 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.58□□□□□ -1.36
YBX1P67809 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.58□□□□□ -1.36
YBX1P67809 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
YBX1P67809 AL049634.1-201ENST00000453770 1720 ntBASIC6.58□□□□□ -1.36
YBX1P67809 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
YBX1P67809 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
YBX1P67809 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
YBX1P67809 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
YBX1P67809 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.58□□□□□ -1.36
YBX1P67809 RBPJP6-201ENST00000411556 1431 ntBASIC6.58□□□□□ -1.36
YBX1P67809 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.58□□□□□ -1.36
YBX1P67809 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
YBX1P67809 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
YBX1P67809 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
YBX1P67809 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
YBX1P67809 AC111188.2-201ENST00000529697 1387 ntBASIC6.57□□□□□ -1.36
YBX1P67809 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.57□□□□□ -1.36
YBX1P67809 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
YBX1P67809 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
YBX1P67809 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.57□□□□□ -1.36
YBX1P67809 OLMALINC-203ENST00000641087 3779 ntBASIC6.57□□□□□ -1.36
YBX1P67809 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.57□□□□□ -1.36
YBX1P67809 ZNF840P-201ENST00000504759 1996 ntBASIC6.57□□□□□ -1.36
YBX1P67809 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.57□□□□□ -1.36
YBX1P67809 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
YBX1P67809 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
YBX1P67809 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.57□□□□□ -1.36
YBX1P67809 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.57□□□□□ -1.36
YBX1P67809 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
YBX1P67809 Y_RNA.3-201ENST00000362331 103 ntBASIC6.57□□□□□ -1.36
YBX1P67809 RNA5SP512-201ENST00000364550 120 ntBASIC6.57□□□□□ -1.36
YBX1P67809 CXADRP1-201ENST00000398098 1095 ntBASIC6.57□□□□□ -1.36
YBX1P67809 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms