Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.07□□□□□ -1.6
UBA52P62987 OR6M2P-201ENST00000529831 871 ntBASIC5.07□□□□□ -1.6
UBA52P62987 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.07□□□□□ -1.6
UBA52P62987 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.07□□□□□ -1.6
UBA52P62987 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.07□□□□□ -1.6
UBA52P62987 AC007956.1-201ENST00000555623 542 ntBASIC5.07□□□□□ -1.6
UBA52P62987 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UBA52P62987 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.07□□□□□ -1.6
UBA52P62987 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.07□□□□□ -1.6
UBA52P62987 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.07□□□□□ -1.6
UBA52P62987 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.07□□□□□ -1.6
UBA52P62987 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
UBA52P62987 AC073333.2-201ENST00000603589 769 ntBASIC5.07□□□□□ -1.6
UBA52P62987 AC006363.1-201ENST00000603806 463 ntBASIC5.07□□□□□ -1.6
UBA52P62987 RPL12P48-201ENST00000605620 304 ntBASIC5.07□□□□□ -1.6
UBA52P62987 FAM72A-208ENST00000607379 1139 ntBASIC5.07□□□□□ -1.6
UBA52P62987 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.07□□□□□ -1.6
UBA52P62987 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UBA52P62987 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UBA52P62987 AL161756.3-201ENST00000641216 2071 ntBASIC5.07□□□□□ -1.6
UBA52P62987 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
UBA52P62987 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.07□□□□□ -1.6
UBA52P62987 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
UBA52P62987 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.07□□□□□ -1.6
UBA52P62987 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
UBA52P62987 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.07□□□□□ -1.6
UBA52P62987 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.07□□□□□ -1.6
UBA52P62987 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UBA52P62987 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.06□□□□□ -1.6
UBA52P62987 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.06□□□□□ -1.6
UBA52P62987 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.06□□□□□ -1.6
UBA52P62987 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UBA52P62987 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.06□□□□□ -1.6
UBA52P62987 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UBA52P62987 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBA52P62987 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UBA52P62987 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
UBA52P62987 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBA52P62987 MIR323A-201ENST00000362199 86 ntBASIC5.06□□□□□ -1.6
UBA52P62987 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
UBA52P62987 RNA5SP284-201ENST00000384547 118 ntBASIC5.06□□□□□ -1.6
UBA52P62987 RNA5SP178-201ENST00000410380 128 ntBASIC5.06□□□□□ -1.6
UBA52P62987 RPL12P18-201ENST00000437175 325 ntBASIC5.06□□□□□ -1.6
UBA52P62987 AL353662.1-201ENST00000439099 327 ntBASIC5.06□□□□□ -1.6
UBA52P62987 CYCSP51-201ENST00000443545 318 ntBASIC5.06□□□□□ -1.6
UBA52P62987 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.06□□□□□ -1.6
UBA52P62987 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.06□□□□□ -1.6
UBA52P62987 AC007998.1-201ENST00000474156 672 ntBASIC5.06□□□□□ -1.6
UBA52P62987 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
UBA52P62987 PDCL3P4-201ENST00000489621 720 ntBASIC5.06□□□□□ -1.6
UBA52P62987 PSMA2P2-201ENST00000504319 686 ntBASIC5.06□□□□□ -1.6
UBA52P62987 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.06□□□□□ -1.6
UBA52P62987 OR5H7P-201ENST00000514084 930 ntBASIC5.06□□□□□ -1.6
UBA52P62987 SNORD46.2-201ENST00000516021 102 ntBASIC5.06□□□□□ -1.6
UBA52P62987 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.06□□□□□ -1.6
UBA52P62987 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.06□□□□□ -1.6
UBA52P62987 OR5D2P-201ENST00000524390 911 ntBASIC5.06□□□□□ -1.6
UBA52P62987 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.06□□□□□ -1.6
UBA52P62987 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.06□□□□□ -1.6
UBA52P62987 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UBA52P62987 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.06□□□□□ -1.6
UBA52P62987 AC020916.2-201ENST00000591242 360 ntBASIC5.06□□□□□ -1.6
UBA52P62987 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.06□□□□□ -1.6
UBA52P62987 AC027243.2-201ENST00000602530 724 ntBASIC5.06□□□□□ -1.6
UBA52P62987 AC092944.2-201ENST00000605443 889 ntBASIC5.06□□□□□ -1.6
UBA52P62987 MIR6768-201ENST00000610734 72 ntBASIC5.06□□□□□ -1.6
UBA52P62987 AC015712.7-201ENST00000615211 635 ntBASIC5.06□□□□□ -1.6
UBA52P62987 AL512652.1-201ENST00000619006 500 ntBASIC5.06□□□□□ -1.6
UBA52P62987 AC127024.6-201ENST00000621598 424 ntBASIC5.06□□□□□ -1.6
UBA52P62987 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
UBA52P62987 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.06□□□□□ -1.6
UBA52P62987 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.06□□□□□ -1.6
UBA52P62987 AC091305.2-201ENST00000624049 1576 ntBASIC5.06□□□□□ -1.6
UBA52P62987 AC018717.1-201ENST00000457712 1505 ntBASIC5.06□□□□□ -1.6
UBA52P62987 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
UBA52P62987 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
UBA52P62987 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UBA52P62987 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UBA52P62987 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UBA52P62987 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBA52P62987 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBA52P62987 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBA52P62987 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBA52P62987 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBA52P62987 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBA52P62987 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
UBA52P62987 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.05□□□□□ -1.6
UBA52P62987 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
UBA52P62987 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UBA52P62987 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UBA52P62987 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UBA52P62987 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.05□□□□□ -1.6
UBA52P62987 AL442128.2-201ENST00000620246 1824 ntBASIC5.05□□□□□ -1.6
UBA52P62987 AC092376.2-201ENST00000622621 4116 ntBASIC5.05□□□□□ -1.6
UBA52P62987 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UBA52P62987 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
UBA52P62987 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
UBA52P62987 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.05□□□□□ -1.6
UBA52P62987 Z68694.1-201ENST00000413929 841 ntBASIC5.05□□□□□ -1.6
UBA52P62987 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms