Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RPL39P62891 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RPL39P62891 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RPL39P62891 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC3.91□□□□□ -1.78
RPL39P62891 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RPL39P62891 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RPL39P62891 NAP1L4P1-201ENST00000319092 1157 ntBASIC3.91□□□□□ -1.78
RPL39P62891 OR9K1P-201ENST00000326513 941 ntBASIC3.91□□□□□ -1.78
RPL39P62891 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC3.91□□□□□ -1.78
RPL39P62891 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RPL39P62891 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RPL39P62891 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RPL39P62891 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC3.91□□□□□ -1.78
RPL39P62891 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC3.91□□□□□ -1.78
RPL39P62891 RPL7AP51-201ENST00000422016 760 ntBASIC3.91□□□□□ -1.78
RPL39P62891 AC092865.3-201ENST00000425390 1026 ntBASIC3.91□□□□□ -1.78
RPL39P62891 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RPL39P62891 GAPDHP75-201ENST00000433910 943 ntBASIC3.91□□□□□ -1.78
RPL39P62891 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC3.91□□□□□ -1.78
RPL39P62891 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC3.91□□□□□ -1.78
RPL39P62891 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC3.91□□□□□ -1.78
RPL39P62891 PPIAP32-201ENST00000449940 472 ntBASIC3.91□□□□□ -1.78
RPL39P62891 AZGP1P2-201ENST00000454506 345 ntBASIC3.91□□□□□ -1.78
RPL39P62891 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC3.91□□□□□ -1.78
RPL39P62891 COX6B1P2-201ENST00000489624 230 ntBASIC3.91□□□□□ -1.78
RPL39P62891 EIF3LP3-201ENST00000495197 822 ntBASIC3.91□□□□□ -1.78
RPL39P62891 AC122714.1-201ENST00000502510 459 ntBASIC3.91□□□□□ -1.78
RPL39P62891 AC021106.1-201ENST00000509020 1058 ntBASIC3.91□□□□□ -1.78
RPL39P62891 AC091912.1-201ENST00000511351 248 ntBASIC3.91□□□□□ -1.78
RPL39P62891 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC3.91□□□□□ -1.78
RPL39P62891 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC3.91□□□□□ -1.78
RPL39P62891 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC3.91□□□□□ -1.78
RPL39P62891 CASC19-203ENST00000523510 575 ntTSL 3 BASIC3.91□□□□□ -1.78
RPL39P62891 SLC25A51P2-201ENST00000535708 889 ntBASIC3.91□□□□□ -1.78
RPL39P62891 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC3.91□□□□□ -1.78
RPL39P62891 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC3.91□□□□□ -1.78
RPL39P62891 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC3.91□□□□□ -1.78
RPL39P62891 AC106730.2-201ENST00000566641 540 ntBASIC3.91□□□□□ -1.78
RPL39P62891 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC3.91□□□□□ -1.78
RPL39P62891 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC3.91□□□□□ -1.78
RPL39P62891 AC108738.1-201ENST00000603703 237 ntBASIC3.91□□□□□ -1.78
RPL39P62891 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC3.91□□□□□ -1.78
RPL39P62891 AL591222.2-201ENST00000604443 754 ntBASIC3.91□□□□□ -1.78
RPL39P62891 IGLCOR22-2-201ENST00000605398 313 ntBASIC3.91□□□□□ -1.78
RPL39P62891 OSTC-205ENST00000613215 876 ntTSL 2 BASIC3.91□□□□□ -1.78
RPL39P62891 AC090607.5-201ENST00000615692 224 ntBASIC3.91□□□□□ -1.78
RPL39P62891 MIR6829-201ENST00000620375 67 ntBASIC3.91□□□□□ -1.78
RPL39P62891 AL136228.1-201ENST00000622221 319 ntBASIC3.91□□□□□ -1.78
RPL39P62891 AC091932.2-201ENST00000623014 291 ntBASIC3.91□□□□□ -1.78
RPL39P62891 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC3.91□□□□□ -1.78
RPL39P62891 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC3.91□□□□□ -1.78
RPL39P62891 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RPL39P62891 AC010325.3-201ENST00000641084 394 ntBASIC3.91□□□□□ -1.78
RPL39P62891 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RPL39P62891 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC3.91□□□□□ -1.78
RPL39P62891 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RPL39P62891 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RPL39P62891 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RPL39P62891 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RPL39P62891 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RPL39P62891 AC100757.1-201ENST00000616872 1835 ntBASIC3.91□□□□□ -1.78
RPL39P62891 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC3.91□□□□□ -1.78
RPL39P62891 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RPL39P62891 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RPL39P62891 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RPL39P62891 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RPL39P62891 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RPL39P62891 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
RPL39P62891 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RPL39P62891 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RPL39P62891 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RPL39P62891 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
RPL39P62891 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC3.9□□□□□ -1.78
RPL39P62891 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC3.9□□□□□ -1.78
RPL39P62891 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC3.9□□□□□ -1.78
RPL39P62891 SMG1P4-204ENST00000523028 4131 ntBASIC3.9□□□□□ -1.78
RPL39P62891 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RPL39P62891 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RPL39P62891 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RPL39P62891 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RPL39P62891 TINAG-203ENST00000370869 782 ntTSL 3 BASIC3.9□□□□□ -1.79
RPL39P62891 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RPL39P62891 AL096711.1-201ENST00000404780 554 ntBASIC3.9□□□□□ -1.79
RPL39P62891 MYB-206ENST00000420123 1051 ntTSL 5 BASIC3.9□□□□□ -1.79
RPL39P62891 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC3.9□□□□□ -1.79
RPL39P62891 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RPL39P62891 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC3.9□□□□□ -1.79
RPL39P62891 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC3.9□□□□□ -1.79
RPL39P62891 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC3.9□□□□□ -1.79
RPL39P62891 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
RPL39P62891 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC3.9□□□□□ -1.79
RPL39P62891 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RPL39P62891 RPL36AP55-201ENST00000454114 305 ntBASIC3.9□□□□□ -1.79
RPL39P62891 GEMIN2P1-201ENST00000454246 752 ntBASIC3.9□□□□□ -1.79
RPL39P62891 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC3.9□□□□□ -1.79
RPL39P62891 AC245028.2-201ENST00000458673 253 ntBASIC3.9□□□□□ -1.79
RPL39P62891 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC3.9□□□□□ -1.79
RPL39P62891 RPL32P33-201ENST00000487023 394 ntBASIC3.9□□□□□ -1.79
RPL39P62891 AL049874.2-201ENST00000492636 288 ntBASIC3.9□□□□□ -1.79
RPL39P62891 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms