Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC5.1□□□□□ -1.59
VBP1P61758 RN7SL426P-201ENST00000579106 295 ntBASIC5.1□□□□□ -1.59
VBP1P61758 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.1□□□□□ -1.59
VBP1P61758 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.1□□□□□ -1.59
VBP1P61758 AL137072.1-201ENST00000603444 466 ntBASIC5.1□□□□□ -1.59
VBP1P61758 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.1□□□□□ -1.59
VBP1P61758 AC083843.3-201ENST00000623679 2186 ntBASIC5.1□□□□□ -1.59
VBP1P61758 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VBP1P61758 SAMMSON-227ENST00000642114 1199 ntBASIC5.1□□□□□ -1.59
VBP1P61758 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VBP1P61758 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.1□□□□□ -1.59
VBP1P61758 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VBP1P61758 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VBP1P61758 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.09□□□□□ -1.59
VBP1P61758 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.09□□□□□ -1.59
VBP1P61758 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VBP1P61758 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.09□□□□□ -1.59
VBP1P61758 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.09□□□□□ -1.59
VBP1P61758 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.09□□□□□ -1.59
VBP1P61758 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VBP1P61758 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VBP1P61758 AL157702.1-201ENST00000398764 426 ntBASIC5.09□□□□□ -1.59
VBP1P61758 AC003045.1-201ENST00000398779 713 ntBASIC5.09□□□□□ -1.59
VBP1P61758 AL035467.1-201ENST00000403583 686 ntBASIC5.09□□□□□ -1.59
VBP1P61758 RNA5SP156-201ENST00000410250 110 ntBASIC5.09□□□□□ -1.59
VBP1P61758 PTP4A1P1-201ENST00000420539 515 ntBASIC5.09□□□□□ -1.59
VBP1P61758 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.09□□□□□ -1.59
VBP1P61758 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
VBP1P61758 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VBP1P61758 OR6R1P-201ENST00000431838 940 ntBASIC5.09□□□□□ -1.59
VBP1P61758 AC092447.2-201ENST00000435487 669 ntBASIC5.09□□□□□ -1.59
VBP1P61758 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.09□□□□□ -1.59
VBP1P61758 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VBP1P61758 RPS6P2-201ENST00000454208 705 ntBASIC5.09□□□□□ -1.59
VBP1P61758 AL079303.1-201ENST00000486611 463 ntBASIC5.09□□□□□ -1.59
VBP1P61758 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.09□□□□□ -1.59
VBP1P61758 RPL7L1P7-201ENST00000509986 724 ntBASIC5.09□□□□□ -1.59
VBP1P61758 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.09□□□□□ -1.59
VBP1P61758 AC092709.1-201ENST00000521355 1045 ntBASIC5.09□□□□□ -1.59
VBP1P61758 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.09□□□□□ -1.59
VBP1P61758 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC5.09□□□□□ -1.59
VBP1P61758 AC139697.1-201ENST00000548429 745 ntBASIC5.09□□□□□ -1.59
VBP1P61758 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.09□□□□□ -1.59
VBP1P61758 DHFRP1-201ENST00000579682 559 ntBASIC5.09□□□□□ -1.59
VBP1P61758 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.09□□□□□ -1.59
VBP1P61758 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.09□□□□□ -1.59
VBP1P61758 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.09□□□□□ -1.59
VBP1P61758 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.09□□□□□ -1.59
VBP1P61758 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.09□□□□□ -1.59
VBP1P61758 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VBP1P61758 NEAT1-202ENST00000501122 22743 ntBASIC5.09□□□□□ -1.59
VBP1P61758 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
VBP1P61758 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.09□□□□□ -1.59
VBP1P61758 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
VBP1P61758 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
VBP1P61758 AL731532.2-201ENST00000623542 1953 ntBASIC5.09□□□□□ -1.6
VBP1P61758 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
VBP1P61758 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
VBP1P61758 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
VBP1P61758 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.6
VBP1P61758 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.09□□□□□ -1.6
VBP1P61758 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
VBP1P61758 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.09□□□□□ -1.6
VBP1P61758 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
VBP1P61758 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
VBP1P61758 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VBP1P61758 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VBP1P61758 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VBP1P61758 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VBP1P61758 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VBP1P61758 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VBP1P61758 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VBP1P61758 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VBP1P61758 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VBP1P61758 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VBP1P61758 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VBP1P61758 SNORA68.2-201ENST00000391263 128 ntBASIC5.08□□□□□ -1.6
VBP1P61758 SNRPEP6-201ENST00000407465 277 ntBASIC5.08□□□□□ -1.6
VBP1P61758 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC5.08□□□□□ -1.6
VBP1P61758 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.08□□□□□ -1.6
VBP1P61758 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.08□□□□□ -1.6
VBP1P61758 RPL12P12-201ENST00000424633 501 ntBASIC5.08□□□□□ -1.6
VBP1P61758 PCBP2P1-201ENST00000437262 977 ntBASIC5.08□□□□□ -1.6
VBP1P61758 AC073465.2-201ENST00000440938 498 ntBASIC5.08□□□□□ -1.6
VBP1P61758 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.08□□□□□ -1.6
VBP1P61758 AC012512.1-201ENST00000446594 718 ntBASIC5.08□□□□□ -1.6
VBP1P61758 COX4I1P2-201ENST00000447446 547 ntBASIC5.08□□□□□ -1.6
VBP1P61758 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.08□□□□□ -1.6
VBP1P61758 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.08□□□□□ -1.6
VBP1P61758 AL049874.2-201ENST00000492636 288 ntBASIC5.08□□□□□ -1.6
VBP1P61758 MYL12BP2-201ENST00000503948 512 ntBASIC5.08□□□□□ -1.6
VBP1P61758 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.08□□□□□ -1.6
VBP1P61758 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.08□□□□□ -1.6
VBP1P61758 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VBP1P61758 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.08□□□□□ -1.6
VBP1P61758 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.08□□□□□ -1.6
VBP1P61758 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC5.08□□□□□ -1.6
VBP1P61758 EIF4A2P5-201ENST00000529914 499 ntBASIC5.08□□□□□ -1.6
VBP1P61758 AC122688.1-201ENST00000541494 223 ntBASIC5.08□□□□□ -1.6
VBP1P61758 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms