Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.12□□□□□ -1.27
RHBDL3P58872 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC7.12□□□□□ -1.27
RHBDL3P58872 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC7.12□□□□□ -1.27
RHBDL3P58872 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.12□□□□□ -1.27
RHBDL3P58872 IGLV3-30-201ENST00000524362 298 ntBASIC7.12□□□□□ -1.27
RHBDL3P58872 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.12□□□□□ -1.27
RHBDL3P58872 SNORD95-201ENST00000579879 68 ntBASIC7.12□□□□□ -1.27
RHBDL3P58872 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC7.12□□□□□ -1.27
RHBDL3P58872 BMS1P7-201ENST00000602440 1052 ntBASIC7.12□□□□□ -1.27
RHBDL3P58872 LSM1P2-201ENST00000604911 322 ntBASIC7.12□□□□□ -1.27
RHBDL3P58872 MIR6768-201ENST00000610734 72 ntBASIC7.12□□□□□ -1.27
RHBDL3P58872 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.12□□□□□ -1.27
RHBDL3P58872 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.12□□□□□ -1.27
RHBDL3P58872 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.12□□□□□ -1.27
RHBDL3P58872 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RHBDL3P58872 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
RHBDL3P58872 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RHBDL3P58872 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RHBDL3P58872 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RHBDL3P58872 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RHBDL3P58872 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.12□□□□□ -1.27
RHBDL3P58872 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RHBDL3P58872 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.12□□□□□ -1.27
RHBDL3P58872 PRNCR1-201ENST00000635449 12727 ntBASIC7.12□□□□□ -1.27
RHBDL3P58872 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RHBDL3P58872 MTCO1P11-201ENST00000429111 1528 ntBASIC7.11□□□□□ -1.27
RHBDL3P58872 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RHBDL3P58872 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.11□□□□□ -1.27
RHBDL3P58872 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
RHBDL3P58872 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
RHBDL3P58872 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RHBDL3P58872 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC7.11□□□□□ -1.27
RHBDL3P58872 PDZK1P1-202ENST00000425209 1350 ntBASIC7.11□□□□□ -1.27
RHBDL3P58872 AC119674.1-213ENST00000641177 1386 ntBASIC7.11□□□□□ -1.27
RHBDL3P58872 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RHBDL3P58872 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.11□□□□□ -1.27
RHBDL3P58872 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
RHBDL3P58872 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 MIR375-201ENST00000362103 64 ntBASIC7.11□□□□□ -1.27
RHBDL3P58872 AL445213.1-201ENST00000412589 747 ntBASIC7.11□□□□□ -1.27
RHBDL3P58872 BTF3P9-201ENST00000418784 283 ntBASIC7.11□□□□□ -1.27
RHBDL3P58872 AC007562.1-201ENST00000421819 517 ntBASIC7.11□□□□□ -1.27
RHBDL3P58872 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC7.11□□□□□ -1.27
RHBDL3P58872 AC127526.2-201ENST00000426436 775 ntBASIC7.11□□□□□ -1.27
RHBDL3P58872 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.11□□□□□ -1.27
RHBDL3P58872 AC023274.2-201ENST00000445264 521 ntBASIC7.11□□□□□ -1.27
RHBDL3P58872 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.11□□□□□ -1.27
RHBDL3P58872 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.11□□□□□ -1.27
RHBDL3P58872 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.11□□□□□ -1.27
RHBDL3P58872 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 RN7SL284P-201ENST00000498823 275 ntBASIC7.11□□□□□ -1.27
RHBDL3P58872 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
RHBDL3P58872 TMEM97P2-201ENST00000517841 403 ntBASIC7.11□□□□□ -1.27
RHBDL3P58872 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RHBDL3P58872 TPM3P3-201ENST00000521343 354 ntBASIC7.11□□□□□ -1.27
RHBDL3P58872 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.11□□□□□ -1.27
RHBDL3P58872 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.11□□□□□ -1.27
RHBDL3P58872 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.11□□□□□ -1.27
RHBDL3P58872 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.11□□□□□ -1.27
RHBDL3P58872 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.11□□□□□ -1.27
RHBDL3P58872 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.11□□□□□ -1.27
RHBDL3P58872 BANCR-201ENST00000624238 473 ntTSL 2 BASIC7.11□□□□□ -1.27
RHBDL3P58872 MIR193BHG-214ENST00000641765 509 ntBASIC7.11□□□□□ -1.27
RHBDL3P58872 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.11□□□□□ -1.27
RHBDL3P58872 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RHBDL3P58872 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.11□□□□□ -1.27
RHBDL3P58872 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RHBDL3P58872 NBPF8-201ENST00000583271 5330 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RHBDL3P58872 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.1□□□□□ -1.27
RHBDL3P58872 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RHBDL3P58872 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.1□□□□□ -1.27
RHBDL3P58872 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.1□□□□□ -1.27
RHBDL3P58872 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RHBDL3P58872 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.1□□□□□ -1.27
RHBDL3P58872 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RHBDL3P58872 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RHBDL3P58872 RNU6-1320P-201ENST00000390838 107 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 RNU6-1269P-201ENST00000391139 107 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 OR1F12-201ENST00000402365 945 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 RN7SKP286-201ENST00000410894 299 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 MRPL53P1-201ENST00000414323 319 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 RPL12P16-201ENST00000431098 498 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 RPS12P17-201ENST00000438591 377 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 RBMY2TP-201ENST00000451162 947 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms