Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.43□□□□□ -1.54
LIM2P55344 AC021733.2-201ENST00000518830 497 ntBASIC5.43□□□□□ -1.54
LIM2P55344 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.43□□□□□ -1.54
LIM2P55344 AC079600.1-201ENST00000550326 297 ntBASIC5.43□□□□□ -1.54
LIM2P55344 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.43□□□□□ -1.54
LIM2P55344 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.43□□□□□ -1.54
LIM2P55344 AC015802.2-201ENST00000589690 189 ntBASIC5.43□□□□□ -1.54
LIM2P55344 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.43□□□□□ -1.54
LIM2P55344 AC027243.2-201ENST00000602530 724 ntBASIC5.43□□□□□ -1.54
LIM2P55344 AP005431.1-201ENST00000618479 319 ntBASIC5.43□□□□□ -1.54
LIM2P55344 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIM2P55344 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
LIM2P55344 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIM2P55344 CASC19-260ENST00000641828 2001 ntBASIC5.43□□□□□ -1.54
LIM2P55344 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIM2P55344 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.42□□□□□ -1.54
LIM2P55344 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LIM2P55344 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LIM2P55344 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.42□□□□□ -1.54
LIM2P55344 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
LIM2P55344 MIR130A-201ENST00000385274 89 ntBASIC5.42□□□□□ -1.54
LIM2P55344 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LIM2P55344 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LIM2P55344 RPL7P58-201ENST00000402913 758 ntBASIC5.42□□□□□ -1.54
LIM2P55344 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LIM2P55344 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.42□□□□□ -1.54
LIM2P55344 AC127526.2-201ENST00000426436 775 ntBASIC5.42□□□□□ -1.54
LIM2P55344 AL022331.1-201ENST00000429025 477 ntBASIC5.42□□□□□ -1.54
LIM2P55344 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.42□□□□□ -1.54
LIM2P55344 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.42□□□□□ -1.54
LIM2P55344 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.42□□□□□ -1.54
LIM2P55344 AC242426.1-201ENST00000435270 960 ntBASIC5.42□□□□□ -1.54
LIM2P55344 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.42□□□□□ -1.54
LIM2P55344 AL445665.1-202ENST00000452436 324 ntBASIC5.42□□□□□ -1.54
LIM2P55344 MEMO1P4-201ENST00000453590 386 ntBASIC5.42□□□□□ -1.54
LIM2P55344 RPS23P2-201ENST00000463671 415 ntBASIC5.42□□□□□ -1.54
LIM2P55344 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LIM2P55344 UBFD1P1-201ENST00000473259 814 ntBASIC5.42□□□□□ -1.54
LIM2P55344 AC022215.1-201ENST00000481770 362 ntBASIC5.42□□□□□ -1.54
LIM2P55344 AC073610.1-201ENST00000489971 396 ntBASIC5.42□□□□□ -1.54
LIM2P55344 DUTP1-201ENST00000493631 470 ntBASIC5.42□□□□□ -1.54
LIM2P55344 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.42□□□□□ -1.54
LIM2P55344 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LIM2P55344 AP004609.2-201ENST00000532177 190 ntBASIC5.42□□□□□ -1.54
LIM2P55344 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.42□□□□□ -1.54
LIM2P55344 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.42□□□□□ -1.54
LIM2P55344 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.42□□□□□ -1.54
LIM2P55344 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.42□□□□□ -1.54
LIM2P55344 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.42□□□□□ -1.54
LIM2P55344 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.42□□□□□ -1.54
LIM2P55344 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.42□□□□□ -1.54
LIM2P55344 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.42□□□□□ -1.54
LIM2P55344 HIRAP1-201ENST00000605318 787 ntBASIC5.42□□□□□ -1.54
LIM2P55344 NANOGP3-201ENST00000605855 286 ntBASIC5.42□□□□□ -1.54
LIM2P55344 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.42□□□□□ -1.54
LIM2P55344 RN7SL544P-201ENST00000617232 284 ntBASIC5.42□□□□□ -1.54
LIM2P55344 MIR6861-201ENST00000618657 64 ntBASIC5.42□□□□□ -1.54
LIM2P55344 AL357153.4-201ENST00000620487 1016 ntBASIC5.42□□□□□ -1.54
LIM2P55344 RN7SL763P-201ENST00000620922 284 ntBASIC5.42□□□□□ -1.54
LIM2P55344 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.42□□□□□ -1.54
LIM2P55344 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.42□□□□□ -1.54
LIM2P55344 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LIM2P55344 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
LIM2P55344 AC079776.5-201ENST00000641920 211 ntBASIC5.42□□□□□ -1.54
LIM2P55344 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LIM2P55344 AL137058.3-201ENST00000624531 3099 ntBASIC5.42□□□□□ -1.54
LIM2P55344 AC239868.2-201ENST00000564237 4527 ntBASIC5.42□□□□□ -1.54
LIM2P55344 TET1P1-201ENST00000426627 2301 ntBASIC5.42□□□□□ -1.54
LIM2P55344 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.42□□□□□ -1.54
LIM2P55344 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
LIM2P55344 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LIM2P55344 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LIM2P55344 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
LIM2P55344 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LIM2P55344 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LIM2P55344 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
LIM2P55344 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
LIM2P55344 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LIM2P55344 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LIM2P55344 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
LIM2P55344 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LIM2P55344 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LIM2P55344 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
LIM2P55344 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
LIM2P55344 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.41□□□□□ -1.54
LIM2P55344 VN1R3-201ENST00000418822 919 ntBASIC5.41□□□□□ -1.54
LIM2P55344 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.41□□□□□ -1.54
LIM2P55344 AC073072.2-201ENST00000447425 348 ntBASIC5.41□□□□□ -1.54
LIM2P55344 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.41□□□□□ -1.54
LIM2P55344 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.41□□□□□ -1.54
LIM2P55344 RPS23P6-201ENST00000466136 431 ntBASIC5.41□□□□□ -1.54
LIM2P55344 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.41□□□□□ -1.54
LIM2P55344 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.41□□□□□ -1.54
LIM2P55344 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.41□□□□□ -1.54
LIM2P55344 AL035661.1-201ENST00000620459 1144 ntBASIC5.41□□□□□ -1.54
LIM2P55344 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.41□□□□□ -1.54
LIM2P55344 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.41□□□□□ -1.54
LIM2P55344 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
LIM2P55344 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LIM2P55344 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms