Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.45□□□□□ -1.54
CDH11P55287 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH11P55287 AL138895.2-201ENST00000603019 178 ntBASIC5.45□□□□□ -1.54
CDH11P55287 AL023583.1-201ENST00000607518 1143 ntBASIC5.45□□□□□ -1.54
CDH11P55287 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH11P55287 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH11P55287 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH11P55287 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.45□□□□□ -1.54
CDH11P55287 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
CDH11P55287 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CDH11P55287 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH11P55287 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.45□□□□□ -1.54
CDH11P55287 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH11P55287 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH11P55287 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CDH11P55287 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH11P55287 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDH11P55287 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH11P55287 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH11P55287 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDH11P55287 AL133243.2-201ENST00000610331 1621 ntBASIC5.45□□□□□ -1.54
CDH11P55287 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDH11P55287 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH11P55287 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH11P55287 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH11P55287 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDH11P55287 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH11P55287 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH11P55287 AC004076.2-201ENST00000620532 3323 ntBASIC5.44□□□□□ -1.54
CDH11P55287 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH11P55287 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH11P55287 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH11P55287 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH11P55287 AC245096.1-201ENST00000413104 546 ntBASIC5.44□□□□□ -1.54
CDH11P55287 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH11P55287 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH11P55287 REREP1Y-201ENST00000422655 198 ntBASIC5.44□□□□□ -1.54
CDH11P55287 KIF4CP-201ENST00000422742 1279 ntBASIC5.44□□□□□ -1.54
CDH11P55287 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH11P55287 REREP2Y-201ENST00000439103 200 ntBASIC5.44□□□□□ -1.54
CDH11P55287 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH11P55287 ACA64.4-201ENST00000459070 127 ntBASIC5.44□□□□□ -1.54
CDH11P55287 NDUFA5P5-201ENST00000468361 342 ntBASIC5.44□□□□□ -1.54
CDH11P55287 AC094085.1-201ENST00000468914 584 ntBASIC5.44□□□□□ -1.54
CDH11P55287 AC093827.1-201ENST00000480094 861 ntBASIC5.44□□□□□ -1.54
CDH11P55287 TRBV8-1-201ENST00000481590 279 ntBASIC5.44□□□□□ -1.54
CDH11P55287 RN7SL284P-201ENST00000498823 275 ntBASIC5.44□□□□□ -1.54
CDH11P55287 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH11P55287 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH11P55287 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH11P55287 AC009879.1-201ENST00000520029 839 ntBASIC5.44□□□□□ -1.54
CDH11P55287 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH11P55287 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH11P55287 AL049874.4-201ENST00000557593 255 ntBASIC5.44□□□□□ -1.54
CDH11P55287 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH11P55287 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.44□□□□□ -1.54
CDH11P55287 AC009268.1-201ENST00000561352 1203 ntBASIC5.44□□□□□ -1.54
CDH11P55287 AC060780.2-201ENST00000589047 198 ntBASIC5.44□□□□□ -1.54
CDH11P55287 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH11P55287 AC022387.2-201ENST00000604050 448 ntBASIC5.44□□□□□ -1.54
CDH11P55287 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH11P55287 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH11P55287 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH11P55287 AC022106.1-201ENST00000612834 766 ntBASIC5.44□□□□□ -1.54
CDH11P55287 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.44□□□□□ -1.54
CDH11P55287 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH11P55287 THAP12P9-201ENST00000503971 2360 ntBASIC5.44□□□□□ -1.54
CDH11P55287 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH11P55287 HSPD1P9-201ENST00000420325 1636 ntBASIC5.44□□□□□ -1.54
CDH11P55287 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CDH11P55287 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH11P55287 AL355488.2-201ENST00000609909 2850 ntBASIC5.44□□□□□ -1.54
CDH11P55287 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
CDH11P55287 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH11P55287 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CDH11P55287 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH11P55287 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH11P55287 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH11P55287 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH11P55287 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH11P55287 AC232271.1-201ENST00000602455 2715 ntBASIC5.43□□□□□ -1.54
CDH11P55287 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
CDH11P55287 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.43□□□□□ -1.54
CDH11P55287 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH11P55287 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH11P55287 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH11P55287 AC093225.1-201ENST00000506867 1408 ntBASIC5.43□□□□□ -1.54
CDH11P55287 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CDH11P55287 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH11P55287 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH11P55287 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDH11P55287 U3.10-201ENST00000364459 214 ntBASIC5.43□□□□□ -1.54
CDH11P55287 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH11P55287 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH11P55287 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH11P55287 MT-RNR1-201ENST00000389680 954 ntBASIC5.43□□□□□ -1.54
CDH11P55287 AC004386.1-201ENST00000393214 761 ntBASIC5.43□□□□□ -1.54
CDH11P55287 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH11P55287 RN7SKP108-201ENST00000411367 328 ntBASIC5.43□□□□□ -1.54
CDH11P55287 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms