Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.58□□□□□ -1.36
HMGCS2P54868 AL118522.2-201ENST00000616045 615 ntBASIC6.58□□□□□ -1.36
HMGCS2P54868 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.58□□□□□ -1.36
HMGCS2P54868 SAMMSON-209ENST00000641222 1100 ntBASIC6.58□□□□□ -1.36
HMGCS2P54868 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.58□□□□□ -1.36
HMGCS2P54868 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.58□□□□□ -1.36
HMGCS2P54868 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.58□□□□□ -1.36
HMGCS2P54868 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.58□□□□□ -1.36
HMGCS2P54868 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.58□□□□□ -1.36
HMGCS2P54868 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
HMGCS2P54868 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HMGCS2P54868 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.57□□□□□ -1.36
HMGCS2P54868 RNA5SP514-201ENST00000363717 111 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.57□□□□□ -1.36
HMGCS2P54868 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 AL353626.3-201ENST00000413399 657 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 RPL23AP27-201ENST00000415161 451 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.57□□□□□ -1.36
HMGCS2P54868 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.57□□□□□ -1.36
HMGCS2P54868 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HMGCS2P54868 AC096775.1-201ENST00000437724 448 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AC245047.2-201ENST00000441060 530 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 RPS23P2-201ENST00000463671 415 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 RN7SL329P-201ENST00000467740 299 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 RN7SL222P-201ENST00000476452 299 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 RPS21P4-201ENST00000487122 248 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AC231760.1-201ENST00000498002 260 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AC096754.1-201ENST00000508904 818 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
HMGCS2P54868 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 AC126615.2-201ENST00000553003 515 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AC000068.2-201ENST00000608816 460 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AL136295.6-201ENST00000610486 658 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 SALL4P7-201ENST00000555779 3120 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 MFSD8-239ENST00000641590 2479 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 AC137056.2-201ENST00000624055 1958 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGCS2P54868 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGCS2P54868 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
HMGCS2P54868 AP003170.5-201ENST00000397185 335 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 AL390774.1-201ENST00000411924 246 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGCS2P54868 OR6D1P-201ENST00000436165 939 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 SUMO2P1-206ENST00000445436 284 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 CT45A11P-201ENST00000448043 1134 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 FAR2P1-206ENST00000449736 709 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGCS2P54868 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 AC004453.1-201ENST00000487895 408 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 RPL15P21-201ENST00000495592 567 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 RN7SKP99-201ENST00000517028 307 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGCS2P54868 AL049779.3-201ENST00000557141 606 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGCS2P54868 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.56□□□□□ -1.36
HMGCS2P54868 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGCS2P54868 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 AC244517.3-201ENST00000616254 1235 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGCS2P54868 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms