Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.58□□□□□ -1.36
HMGCS2P54868 AL118522.2-201ENST00000616045 615 ntBASIC6.58□□□□□ -1.36
HMGCS2P54868 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.58□□□□□ -1.36
HMGCS2P54868 SAMMSON-209ENST00000641222 1100 ntBASIC6.58□□□□□ -1.36
HMGCS2P54868 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.58□□□□□ -1.36
HMGCS2P54868 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.58□□□□□ -1.36
HMGCS2P54868 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.58□□□□□ -1.36
HMGCS2P54868 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.58□□□□□ -1.36
HMGCS2P54868 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.58□□□□□ -1.36
HMGCS2P54868 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
HMGCS2P54868 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HMGCS2P54868 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.57□□□□□ -1.36
HMGCS2P54868 RNA5SP514-201ENST00000363717 111 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.57□□□□□ -1.36
HMGCS2P54868 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 AL353626.3-201ENST00000413399 657 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 RPL23AP27-201ENST00000415161 451 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.57□□□□□ -1.36
HMGCS2P54868 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.57□□□□□ -1.36
HMGCS2P54868 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HMGCS2P54868 AC096775.1-201ENST00000437724 448 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AC245047.2-201ENST00000441060 530 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 RPS23P2-201ENST00000463671 415 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 RN7SL329P-201ENST00000467740 299 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 RN7SL222P-201ENST00000476452 299 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 RPS21P4-201ENST00000487122 248 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AC231760.1-201ENST00000498002 260 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AC096754.1-201ENST00000508904 818 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
HMGCS2P54868 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 AC126615.2-201ENST00000553003 515 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AC000068.2-201ENST00000608816 460 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AL136295.6-201ENST00000610486 658 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 SALL4P7-201ENST00000555779 3120 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 MFSD8-239ENST00000641590 2479 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGCS2P54868 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 AC137056.2-201ENST00000624055 1958 ntBASIC6.57□□□□□ -1.36
HMGCS2P54868 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGCS2P54868 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGCS2P54868 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGCS2P54868 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
HMGCS2P54868 AP003170.5-201ENST00000397185 335 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 AL390774.1-201ENST00000411924 246 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGCS2P54868 OR6D1P-201ENST00000436165 939 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 SUMO2P1-206ENST00000445436 284 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 CT45A11P-201ENST00000448043 1134 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 FAR2P1-206ENST00000449736 709 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGCS2P54868 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 AC004453.1-201ENST00000487895 408 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 RPL15P21-201ENST00000495592 567 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 RN7SKP99-201ENST00000517028 307 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGCS2P54868 AL049779.3-201ENST00000557141 606 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGCS2P54868 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.56□□□□□ -1.36
HMGCS2P54868 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGCS2P54868 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 AC244517.3-201ENST00000616254 1235 ntBASIC6.56□□□□□ -1.36
HMGCS2P54868 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGCS2P54868 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms