Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC023510.2-201ENST00000622162 746 ntBASIC6.46□□□□□ -1.38
COPB1P53618 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.46□□□□□ -1.38
COPB1P53618 CASC19-274ENST00000642018 970 ntBASIC6.46□□□□□ -1.38
COPB1P53618 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
COPB1P53618 AC027279.1-201ENST00000568885 4284 ntBASIC6.46□□□□□ -1.38
COPB1P53618 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
COPB1P53618 AC140134.1-201ENST00000511830 3544 ntBASIC6.46□□□□□ -1.38
COPB1P53618 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
COPB1P53618 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COPB1P53618 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.45□□□□□ -1.38
COPB1P53618 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COPB1P53618 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COPB1P53618 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.45□□□□□ -1.38
COPB1P53618 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COPB1P53618 AC114774.1-201ENST00000507410 1770 ntBASIC6.45□□□□□ -1.38
COPB1P53618 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
COPB1P53618 RN7SKP171-201ENST00000364417 303 ntBASIC6.45□□□□□ -1.38
COPB1P53618 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COPB1P53618 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.45□□□□□ -1.38
COPB1P53618 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COPB1P53618 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.45□□□□□ -1.38
COPB1P53618 AL035422.1-201ENST00000414193 397 ntBASIC6.45□□□□□ -1.38
COPB1P53618 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COPB1P53618 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.45□□□□□ -1.38
COPB1P53618 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.45□□□□□ -1.38
COPB1P53618 AL445928.1-201ENST00000435545 222 ntBASIC6.45□□□□□ -1.38
COPB1P53618 AC023141.3-201ENST00000436698 278 ntBASIC6.45□□□□□ -1.38
COPB1P53618 TRIM60P16-201ENST00000444048 694 ntBASIC6.45□□□□□ -1.38
COPB1P53618 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.45□□□□□ -1.38
COPB1P53618 AC004129.2-201ENST00000457229 287 ntBASIC6.45□□□□□ -1.38
COPB1P53618 AC093827.1-201ENST00000480094 861 ntBASIC6.45□□□□□ -1.38
COPB1P53618 AC008629.2-201ENST00000503783 483 ntBASIC6.45□□□□□ -1.38
COPB1P53618 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COPB1P53618 SNORA70.17-201ENST00000516449 133 ntBASIC6.45□□□□□ -1.38
COPB1P53618 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.45□□□□□ -1.38
COPB1P53618 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.45□□□□□ -1.38
COPB1P53618 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.45□□□□□ -1.38
COPB1P53618 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.45□□□□□ -1.38
COPB1P53618 ZNF322P1-201ENST00000568013 1209 ntBASIC6.45□□□□□ -1.38
COPB1P53618 MRPS21P8-201ENST00000569196 235 ntBASIC6.45□□□□□ -1.38
COPB1P53618 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.45□□□□□ -1.38
COPB1P53618 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COPB1P53618 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.45□□□□□ -1.38
COPB1P53618 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.45□□□□□ -1.38
COPB1P53618 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.45□□□□□ -1.38
COPB1P53618 AC090330.1-201ENST00000588646 764 ntBASIC6.45□□□□□ -1.38
COPB1P53618 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.45□□□□□ -1.38
COPB1P53618 AC020915.5-201ENST00000596836 964 ntBASIC6.45□□□□□ -1.38
COPB1P53618 AC087468.1-201ENST00000604365 630 ntBASIC6.45□□□□□ -1.38
COPB1P53618 AC110792.4-201ENST00000609843 298 ntBASIC6.45□□□□□ -1.38
COPB1P53618 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.45□□□□□ -1.38
COPB1P53618 AC009032.1-201ENST00000617574 431 ntBASIC6.45□□□□□ -1.38
COPB1P53618 AC073592.6-201ENST00000624271 415 ntBASIC6.45□□□□□ -1.38
COPB1P53618 AP001052.1-201ENST00000626421 99 ntBASIC6.45□□□□□ -1.38
COPB1P53618 AC079776.5-201ENST00000641920 211 ntBASIC6.45□□□□□ -1.38
COPB1P53618 MFSD8-239ENST00000641590 2479 ntBASIC6.45□□□□□ -1.38
COPB1P53618 AC239868.2-201ENST00000564237 4527 ntBASIC6.45□□□□□ -1.38
COPB1P53618 BX284613.1-201ENST00000452221 1641 ntBASIC6.45□□□□□ -1.38
COPB1P53618 GNL2P1-201ENST00000451274 2190 ntBASIC6.45□□□□□ -1.38
COPB1P53618 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COPB1P53618 FBXL21-201ENST00000297158 1305 ntBASIC6.45□□□□□ -1.38
COPB1P53618 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COPB1P53618 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.45□□□□□ -1.38
COPB1P53618 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COPB1P53618 MTCO1P28-201ENST00000574177 1528 ntBASIC6.45□□□□□ -1.38
COPB1P53618 AL049634.1-201ENST00000453770 1720 ntBASIC6.45□□□□□ -1.38
COPB1P53618 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COPB1P53618 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
COPB1P53618 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.44□□□□□ -1.38
COPB1P53618 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.44□□□□□ -1.38
COPB1P53618 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COPB1P53618 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COPB1P53618 AC020656.2-201ENST00000613291 5309 ntBASIC6.44□□□□□ -1.38
COPB1P53618 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COPB1P53618 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
COPB1P53618 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.44□□□□□ -1.38
COPB1P53618 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COPB1P53618 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COPB1P53618 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COPB1P53618 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
COPB1P53618 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.44□□□□□ -1.38
COPB1P53618 RPL35AP3-201ENST00000414680 288 ntBASIC6.44□□□□□ -1.38
COPB1P53618 GTF3AP1-201ENST00000416942 1004 ntBASIC6.44□□□□□ -1.38
COPB1P53618 RPS4XP5-201ENST00000419038 768 ntBASIC6.44□□□□□ -1.38
COPB1P53618 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.44□□□□□ -1.38
COPB1P53618 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.44□□□□□ -1.38
COPB1P53618 RPL7AP14-201ENST00000424041 802 ntBASIC6.44□□□□□ -1.38
COPB1P53618 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.44□□□□□ -1.38
COPB1P53618 RPSAP32-201ENST00000432681 526 ntBASIC6.44□□□□□ -1.38
COPB1P53618 AC074367.1-201ENST00000438685 1125 ntBASIC6.44□□□□□ -1.38
COPB1P53618 AC073072.2-201ENST00000447425 348 ntBASIC6.44□□□□□ -1.38
COPB1P53618 AC093166.3-201ENST00000448785 303 ntBASIC6.44□□□□□ -1.38
COPB1P53618 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.44□□□□□ -1.38
COPB1P53618 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.44□□□□□ -1.38
COPB1P53618 RN7SKP157-201ENST00000516174 282 ntBASIC6.44□□□□□ -1.38
COPB1P53618 RNU6-964P-201ENST00000516524 69 ntBASIC6.44□□□□□ -1.38
COPB1P53618 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.44□□□□□ -1.38
COPB1P53618 MTND1P6-201ENST00000523621 946 ntBASIC6.44□□□□□ -1.38
COPB1P53618 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.44□□□□□ -1.38
COPB1P53618 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms