Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 AADACP1-206ENST00000561502 1193 ntBASIC7.24□□□□□ -1.25
LIG3P49916 ACTR3BP3-201ENST00000565577 979 ntBASIC7.24□□□□□ -1.25
LIG3P49916 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC7.24□□□□□ -1.25
LIG3P49916 MIR4470-201ENST00000583453 72 ntBASIC7.24□□□□□ -1.25
LIG3P49916 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.24□□□□□ -1.25
LIG3P49916 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC7.24□□□□□ -1.25
LIG3P49916 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC7.24□□□□□ -1.25
LIG3P49916 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC7.24□□□□□ -1.25
LIG3P49916 AK6-205ENST00000618980 483 ntTSL 2 BASIC7.24□□□□□ -1.25
LIG3P49916 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.24□□□□□ -1.25
LIG3P49916 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.24□□□□□ -1.25
LIG3P49916 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
LIG3P49916 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.24□□□□□ -1.25
LIG3P49916 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
LIG3P49916 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LIG3P49916 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LIG3P49916 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LIG3P49916 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LIG3P49916 AL390237.1-201ENST00000404226 1415 ntBASIC7.24□□□□□ -1.25
LIG3P49916 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
LIG3P49916 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
LIG3P49916 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LIG3P49916 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.24□□□□□ -1.25
LIG3P49916 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
LIG3P49916 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.24□□□□□ -1.25
LIG3P49916 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.24□□□□□ -1.25
LIG3P49916 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.24□□□□□ -1.25
LIG3P49916 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
LIG3P49916 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LIG3P49916 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LIG3P49916 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
LIG3P49916 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LIG3P49916 AL033543.1-201ENST00000623440 13454 ntBASIC7.23□□□□□ -1.25
LIG3P49916 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LIG3P49916 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.23□□□□□ -1.25
LIG3P49916 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LIG3P49916 AC009779.8-201ENST00000641684 4384 ntBASIC7.23□□□□□ -1.25
LIG3P49916 Y_RNA.465-201ENST00000384293 102 ntBASIC7.23□□□□□ -1.25
LIG3P49916 MIR27A-201ENST00000385073 78 ntBASIC7.23□□□□□ -1.25
LIG3P49916 YWHAZP4-201ENST00000392459 708 ntBASIC7.23□□□□□ -1.25
LIG3P49916 FAUP2-201ENST00000394301 401 ntBASIC7.23□□□□□ -1.25
LIG3P49916 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.23□□□□□ -1.25
LIG3P49916 RN7SKP166-201ENST00000410812 305 ntBASIC7.23□□□□□ -1.25
LIG3P49916 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG3P49916 LINC01347-201ENST00000417964 355 ntBASIC7.23□□□□□ -1.25
LIG3P49916 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LIG3P49916 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LIG3P49916 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG3P49916 AL365220.1-201ENST00000432923 399 ntBASIC7.23□□□□□ -1.25
LIG3P49916 AC129850.1-201ENST00000436203 508 ntBASIC7.23□□□□□ -1.25
LIG3P49916 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.23□□□□□ -1.25
LIG3P49916 RPS19P6-201ENST00000441327 433 ntBASIC7.23□□□□□ -1.25
LIG3P49916 GTF2IP14-201ENST00000441415 586 ntBASIC7.23□□□□□ -1.25
LIG3P49916 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.23□□□□□ -1.25
LIG3P49916 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LIG3P49916 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG3P49916 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.23□□□□□ -1.25
LIG3P49916 AC005517.1-201ENST00000452091 489 ntBASIC7.23□□□□□ -1.25
LIG3P49916 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG3P49916 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.23□□□□□ -1.25
LIG3P49916 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.23□□□□□ -1.25
LIG3P49916 AC107015.1-201ENST00000466902 747 ntBASIC7.23□□□□□ -1.25
LIG3P49916 AC131233.1-201ENST00000479200 955 ntBASIC7.23□□□□□ -1.25
LIG3P49916 RN7SL775P-201ENST00000498361 336 ntBASIC7.23□□□□□ -1.25
LIG3P49916 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC7.23□□□□□ -1.25
LIG3P49916 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG3P49916 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
LIG3P49916 AC008967.1-201ENST00000504843 163 ntBASIC7.23□□□□□ -1.25
LIG3P49916 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC7.23□□□□□ -1.25
LIG3P49916 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG3P49916 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LIG3P49916 NACAP6-201ENST00000509572 622 ntBASIC7.23□□□□□ -1.25
LIG3P49916 AC146944.3-201ENST00000509969 371 ntBASIC7.23□□□□□ -1.25
LIG3P49916 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG3P49916 RPL10P18-201ENST00000519384 309 ntBASIC7.23□□□□□ -1.25
LIG3P49916 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG3P49916 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG3P49916 ST13P6-201ENST00000522430 1102 ntBASIC7.23□□□□□ -1.25
LIG3P49916 SLC25A51P2-201ENST00000535708 889 ntBASIC7.23□□□□□ -1.25
LIG3P49916 AC023080.1-201ENST00000551663 931 ntBASIC7.23□□□□□ -1.25
LIG3P49916 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG3P49916 DUXAP1-201ENST00000556632 463 ntBASIC7.23□□□□□ -1.25
LIG3P49916 ULK4P1-202ENST00000565174 503 ntBASIC7.23□□□□□ -1.25
LIG3P49916 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG3P49916 RN7SL667P-201ENST00000582817 298 ntBASIC7.23□□□□□ -1.25
LIG3P49916 AP001981.2-201ENST00000603241 418 ntBASIC7.23□□□□□ -1.25
LIG3P49916 AC011374.2-201ENST00000607135 526 ntBASIC7.23□□□□□ -1.25
LIG3P49916 AC103591.3-201ENST00000608684 209 ntBASIC7.23□□□□□ -1.25
LIG3P49916 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LIG3P49916 AC007671.1-201ENST00000616957 830 ntBASIC7.23□□□□□ -1.25
LIG3P49916 AC027506.1-201ENST00000621395 198 ntBASIC7.23□□□□□ -1.25
LIG3P49916 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.23□□□□□ -1.25
LIG3P49916 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LIG3P49916 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LIG3P49916 OFD1P17-201ENST00000437639 3018 ntBASIC7.23□□□□□ -1.25
LIG3P49916 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LIG3P49916 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.23□□□□□ -1.25
LIG3P49916 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
LIG3P49916 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
LIG3P49916 AC073055.1-201ENST00000456901 1621 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms