Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.07□□□□□ -1.6
HOXA1P49639 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.07□□□□□ -1.6
HOXA1P49639 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA1P49639 NPM1P29-201ENST00000483112 803 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 OR9A1P-202ENST00000484361 945 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA1P49639 COX6B1P2-201ENST00000489624 230 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 AC093890.1-201ENST00000502554 540 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 AC093763.2-201ENST00000505334 1223 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA1P49639 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA1P49639 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA1P49639 AC027338.1-201ENST00000514840 825 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.07□□□□□ -1.6
HOXA1P49639 RNU6-1102P-201ENST00000516149 96 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA1P49639 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA1P49639 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA1P49639 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.07□□□□□ -1.6
HOXA1P49639 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA1P49639 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.07□□□□□ -1.6
HOXA1P49639 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA1P49639 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.07□□□□□ -1.6
HOXA1P49639 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.07□□□□□ -1.6
HOXA1P49639 AC079148.1-201ENST00000565944 819 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 AC092718.4-201ENST00000566639 716 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 AC068408.1-201ENST00000577406 1144 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 AP001496.3-201ENST00000580230 913 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 AC126365.2-201ENST00000580630 379 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.07□□□□□ -1.6
HOXA1P49639 MIR4472-2-201ENST00000582069 67 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXA1P49639 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.07□□□□□ -1.6
HOXA1P49639 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA1P49639 AL391834.2-201ENST00000609982 546 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 MIR7159-201ENST00000620587 66 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 AC027506.1-201ENST00000621395 198 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 AC079298.2-201ENST00000623885 459 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 AC110792.3-201ENST00000595906 1614 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXA1P49639 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HOXA1P49639 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HOXA1P49639 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HOXA1P49639 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HOXA1P49639 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HOXA1P49639 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXA1P49639 AC092692.1-201ENST00000623625 2595 ntBASIC5.07□□□□□ -1.6
HOXA1P49639 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA1P49639 RBPJP7-201ENST00000442803 1447 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA1P49639 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HOXA1P49639 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA1P49639 BTBD10P1-201ENST00000549824 1352 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA1P49639 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA1P49639 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA1P49639 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HOXA1P49639 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA1P49639 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA1P49639 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA1P49639 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
HOXA1P49639 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXA1P49639 SNORD1C-201ENST00000363315 78 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA1P49639 MIR188-201ENST00000385034 86 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 RN7SKP281-201ENST00000410472 352 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXA1P49639 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HOXA1P49639 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA1P49639 AL672212.1-201ENST00000422246 400 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 RNF19BPX-201ENST00000426224 625 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 AC016027.5-201ENST00000427227 210 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 RAB9AP5-201ENST00000437794 597 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXA1P49639 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXA1P49639 RAB9AP2-201ENST00000443911 597 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 AL158214.1-201ENST00000444423 404 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA1P49639 AC022080.2-201ENST00000452932 533 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 AP002345.1-201ENST00000456493 928 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 AL133480.2-201ENST00000456723 487 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.06□□□□□ -1.6
HOXA1P49639 RPSAP51-201ENST00000497462 645 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.06□□□□□ -1.6
HOXA1P49639 AC073648.3-201ENST00000504939 925 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA1P49639 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 GAPDHP71-201ENST00000511530 1003 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 AC096661.1-201ENST00000515870 822 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 RN7SKP196-201ENST00000516267 345 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 NPM1P52-201ENST00000518264 846 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 AC009879.1-201ENST00000520029 839 ntBASIC5.06□□□□□ -1.6
HOXA1P49639 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXA1P49639 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXA1P49639 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA1P49639 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXA1P49639 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXA1P49639 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HOXA1P49639 RN7SL131P-201ENST00000579043 256 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms