Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.93□□□□□ -1.62
NKX2-1P43699 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-1P43699 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-1P43699 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX2-1P43699 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX2-1P43699 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-1P43699 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-1P43699 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-1P43699 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-1P43699 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
NKX2-1P43699 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-1P43699 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX2-1P43699 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
NKX2-1P43699 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX2-1P43699 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
NKX2-1P43699 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-1P43699 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-1P43699 MIR137-201ENST00000385223 102 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 RPL11P3-201ENST00000395256 523 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-1P43699 ZNF37CP-201ENST00000406795 241 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX2-1P43699 DPPA2P2-201ENST00000418220 897 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 NENFP1-201ENST00000419476 466 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX2-1P43699 VTI1BP4-201ENST00000427516 527 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 AC099670.2-201ENST00000435130 321 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 PPIAP10-201ENST00000438675 458 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX2-1P43699 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AL691517.1-201ENST00000440833 1235 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AKR1D1P1-201ENST00000457236 936 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 ACA64.4-201ENST00000459070 127 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX2-1P43699 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-1P43699 AL079303.1-201ENST00000486611 463 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 SNX18P24-201ENST00000505249 671 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AC034244.2-201ENST00000514668 858 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 AC112206.4-201ENST00000515142 405 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX2-1P43699 OR4R2P-201ENST00000530815 597 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 AC134349.2-201ENST00000535136 910 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 SLC25A51P2-201ENST00000535708 889 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 AP000619.2-201ENST00000546014 969 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 AC023080.1-201ENST00000551663 931 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-1P43699 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AL163952.1-202ENST00000569625 600 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX2-1P43699 RPL7AP69-201ENST00000595306 806 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AC141002.1-201ENST00000607025 279 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AC253576.2-201ENST00000618815 580 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.92□□□□□ -1.62
NKX2-1P43699 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-1P43699 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-1P43699 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
NKX2-1P43699 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.92□□□□□ -1.62
NKX2-1P43699 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AC026523.2-201ENST00000625039 7739 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX2-1P43699 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX2-1P43699 AC109446.4-201ENST00000623235 2755 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 AC068446.1-201ENST00000556425 1549 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 AC024651.2-201ENST00000562480 2098 ntBASIC4.92□□□□□ -1.62
NKX2-1P43699 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX2-1P43699 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NKX2-1P43699 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NKX2-1P43699 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
NKX2-1P43699 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC4.91□□□□□ -1.62
NKX2-1P43699 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
NKX2-1P43699 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
NKX2-1P43699 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.91□□□□□ -1.62
NKX2-1P43699 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NKX2-1P43699 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NKX2-1P43699 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NKX2-1P43699 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NKX2-1P43699 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC4.91□□□□□ -1.62
NKX2-1P43699 RNU1-49P-201ENST00000363468 159 ntBASIC4.91□□□□□ -1.62
NKX2-1P43699 RNU1-84P-201ENST00000365447 164 ntBASIC4.91□□□□□ -1.62
NKX2-1P43699 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NKX2-1P43699 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.91□□□□□ -1.62
NKX2-1P43699 AC026310.1-201ENST00000396004 378 ntBASIC4.91□□□□□ -1.62
NKX2-1P43699 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.91□□□□□ -1.62
NKX2-1P43699 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
NKX2-1P43699 RN7SKP221-201ENST00000410420 301 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms