Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
RFC3P40938 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 AL355488.2-201ENST00000609909 2850 ntBASIC5.41□□□□□ -1.54
RFC3P40938 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RFC3P40938 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RFC3P40938 MIR323A-201ENST00000362199 86 ntBASIC5.41□□□□□ -1.54
RFC3P40938 RPL23AP17-201ENST00000401064 499 ntBASIC5.41□□□□□ -1.54
RFC3P40938 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RFC3P40938 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.41□□□□□ -1.54
RFC3P40938 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.41□□□□□ -1.54
RFC3P40938 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.41□□□□□ -1.54
RFC3P40938 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.41□□□□□ -1.54
RFC3P40938 AC064862.4-201ENST00000442180 334 ntBASIC5.41□□□□□ -1.54
RFC3P40938 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.41□□□□□ -1.54
RFC3P40938 RPS7P3-201ENST00000443360 580 ntBASIC5.41□□□□□ -1.54
RFC3P40938 CYCSP51-201ENST00000443545 318 ntBASIC5.41□□□□□ -1.54
RFC3P40938 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.41□□□□□ -1.54
RFC3P40938 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.41□□□□□ -1.54
RFC3P40938 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 AC093166.4-201ENST00000457867 318 ntBASIC5.41□□□□□ -1.54
RFC3P40938 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 AC124945.1-201ENST00000485133 188 ntBASIC5.41□□□□□ -1.54
RFC3P40938 RN7SL284P-201ENST00000498823 275 ntBASIC5.41□□□□□ -1.54
RFC3P40938 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.41□□□□□ -1.54
RFC3P40938 NPM1P21-201ENST00000513394 762 ntBASIC5.41□□□□□ -1.54
RFC3P40938 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.41□□□□□ -1.54
RFC3P40938 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.41□□□□□ -1.54
RFC3P40938 GTF2IP11-201ENST00000526931 420 ntBASIC5.41□□□□□ -1.54
RFC3P40938 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.41□□□□□ -1.54
RFC3P40938 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.41□□□□□ -1.54
RFC3P40938 AC015802.2-201ENST00000589690 189 ntBASIC5.41□□□□□ -1.54
RFC3P40938 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 AL136131.3-201ENST00000607600 188 ntBASIC5.41□□□□□ -1.54
RFC3P40938 AC004477.3-201ENST00000614061 590 ntBASIC5.41□□□□□ -1.54
RFC3P40938 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 OR11H2-202ENST00000641517 1085 ntBASIC5.41□□□□□ -1.54
RFC3P40938 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
RFC3P40938 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.41□□□□□ -1.54
RFC3P40938 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.41□□□□□ -1.54
RFC3P40938 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
RFC3P40938 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.41□□□□□ -1.54
RFC3P40938 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFC3P40938 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFC3P40938 AL121839.2-201ENST00000565058 6943 ntBASIC5.4□□□□□ -1.54
RFC3P40938 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
RFC3P40938 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RFC3P40938 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.4□□□□□ -1.54
RFC3P40938 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
RFC3P40938 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
RFC3P40938 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFC3P40938 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RFC3P40938 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.4□□□□□ -1.54
RFC3P40938 SHQ1P1-201ENST00000437111 1544 ntBASIC5.4□□□□□ -1.54
RFC3P40938 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFC3P40938 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RFC3P40938 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFC3P40938 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFC3P40938 RNA5SP500-201ENST00000364486 119 ntBASIC5.4□□□□□ -1.54
RFC3P40938 RN7SKP229-201ENST00000410465 302 ntBASIC5.4□□□□□ -1.54
RFC3P40938 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.4□□□□□ -1.54
RFC3P40938 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.4□□□□□ -1.54
RFC3P40938 AC079355.1-201ENST00000421770 223 ntBASIC5.4□□□□□ -1.54
RFC3P40938 KIF4CP-201ENST00000422742 1279 ntBASIC5.4□□□□□ -1.54
RFC3P40938 SUMO2P3-201ENST00000438311 288 ntBASIC5.4□□□□□ -1.54
RFC3P40938 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.4□□□□□ -1.54
RFC3P40938 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RFC3P40938 AL445665.1-202ENST00000452436 324 ntBASIC5.4□□□□□ -1.54
RFC3P40938 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.4□□□□□ -1.54
RFC3P40938 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFC3P40938 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.4□□□□□ -1.54
RFC3P40938 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.4□□□□□ -1.54
RFC3P40938 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.4□□□□□ -1.54
RFC3P40938 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.4□□□□□ -1.54
RFC3P40938 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.4□□□□□ -1.54
RFC3P40938 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.4□□□□□ -1.54
RFC3P40938 SNORA70.20-201ENST00000516848 126 ntBASIC5.4□□□□□ -1.54
RFC3P40938 OR6M2P-201ENST00000529831 871 ntBASIC5.4□□□□□ -1.54
RFC3P40938 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.4□□□□□ -1.54
RFC3P40938 AL356801.1-201ENST00000559320 294 ntBASIC5.4□□□□□ -1.54
RFC3P40938 AC019322.1-201ENST00000571869 389 ntBASIC5.4□□□□□ -1.54
RFC3P40938 TXNP4-201ENST00000575018 310 ntBASIC5.4□□□□□ -1.54
RFC3P40938 AC020978.7-201ENST00000575953 1187 ntBASIC5.4□□□□□ -1.54
RFC3P40938 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
RFC3P40938 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.4□□□□□ -1.54
RFC3P40938 SNORD95-201ENST00000579879 68 ntBASIC5.4□□□□□ -1.54
RFC3P40938 MIR4433B-201ENST00000581329 102 ntBASIC5.4□□□□□ -1.54
RFC3P40938 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.4□□□□□ -1.54
RFC3P40938 AP000894.4-201ENST00000610185 483 ntBASIC5.4□□□□□ -1.54
RFC3P40938 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.4□□□□□ -1.54
RFC3P40938 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms