Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.85□□□□□ -1.47
FDFT1P37268 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
FDFT1P37268 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
FDFT1P37268 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
FDFT1P37268 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
FDFT1P37268 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
FDFT1P37268 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
FDFT1P37268 AP005435.3-201ENST00000531260 3198 ntBASIC5.85□□□□□ -1.47
FDFT1P37268 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
FDFT1P37268 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
FDFT1P37268 AC012078.1-201ENST00000405035 1646 ntBASIC5.85□□□□□ -1.47
FDFT1P37268 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FDFT1P37268 UGT2B24P-201ENST00000514441 1597 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.84□□□□□ -1.47
FDFT1P37268 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FDFT1P37268 CAP1P2-201ENST00000417455 1409 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.84□□□□□ -1.47
FDFT1P37268 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
FDFT1P37268 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.84□□□□□ -1.47
FDFT1P37268 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
FDFT1P37268 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FDFT1P37268 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FDFT1P37268 ICE2P1-201ENST00000512800 1849 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FDFT1P37268 SNORA5.1-201ENST00000384275 131 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 AL357752.1-201ENST00000412817 349 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 NIFKP3-201ENST00000417799 865 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.84□□□□□ -1.47
FDFT1P37268 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.84□□□□□ -1.47
FDFT1P37268 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.84□□□□□ -1.47
FDFT1P37268 RN7SL570P-201ENST00000484405 292 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 RPL9P15-201ENST00000491096 532 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 DUTP1-201ENST00000493631 470 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.84□□□□□ -1.47
FDFT1P37268 RNU6-1334P-201ENST00000516032 105 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.84□□□□□ -1.47
FDFT1P37268 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.84□□□□□ -1.47
FDFT1P37268 AC137627.1-201ENST00000545761 289 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 AC139697.1-201ENST00000548429 745 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 CYCSP38-201ENST00000559840 322 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 AC026826.3-201ENST00000561747 158 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 AC096996.1-201ENST00000563813 325 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 AC019322.1-201ENST00000571869 389 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.84□□□□□ -1.47
FDFT1P37268 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.84□□□□□ -1.47
FDFT1P37268 AL359091.2-201ENST00000609303 556 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 MIR6806-201ENST00000622141 64 ntBASIC5.84□□□□□ -1.47
FDFT1P37268 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.84□□□□□ -1.47
FDFT1P37268 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.84□□□□□ -1.47
FDFT1P37268 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FDFT1P37268 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FDFT1P37268 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
FDFT1P37268 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
FDFT1P37268 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
FDFT1P37268 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
FDFT1P37268 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.48
FDFT1P37268 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
FDFT1P37268 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
FDFT1P37268 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
FDFT1P37268 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FDFT1P37268 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.83□□□□□ -1.48
FDFT1P37268 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
FDFT1P37268 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FDFT1P37268 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.83□□□□□ -1.48
FDFT1P37268 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FDFT1P37268 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FDFT1P37268 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.83□□□□□ -1.48
FDFT1P37268 RN7SKP185-201ENST00000362813 326 ntBASIC5.83□□□□□ -1.48
FDFT1P37268 NACAP7-201ENST00000407371 609 ntBASIC5.83□□□□□ -1.48
FDFT1P37268 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.83□□□□□ -1.48
FDFT1P37268 RPS27AP6-201ENST00000427962 448 ntBASIC5.83□□□□□ -1.48
FDFT1P37268 AC126120.1-201ENST00000431082 470 ntBASIC5.83□□□□□ -1.48
FDFT1P37268 TMEM183AP1-205ENST00000432739 290 ntBASIC5.83□□□□□ -1.48
FDFT1P37268 AC007679.3-201ENST00000434035 414 ntBASIC5.83□□□□□ -1.48
FDFT1P37268 GAPDHP48-201ENST00000436626 961 ntBASIC5.83□□□□□ -1.48
FDFT1P37268 AC118758.1-202ENST00000454719 225 ntBASIC5.83□□□□□ -1.48
FDFT1P37268 RPS17P5-201ENST00000498293 408 ntBASIC5.83□□□□□ -1.48
FDFT1P37268 AC092349.1-201ENST00000504903 310 ntBASIC5.83□□□□□ -1.48
FDFT1P37268 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.83□□□□□ -1.48
FDFT1P37268 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.83□□□□□ -1.48
FDFT1P37268 AC139365.2-201ENST00000517972 253 ntBASIC5.83□□□□□ -1.48
FDFT1P37268 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.83□□□□□ -1.48
FDFT1P37268 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.83□□□□□ -1.48
FDFT1P37268 HMGN2P36-201ENST00000529541 409 ntBASIC5.83□□□□□ -1.48
FDFT1P37268 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.83□□□□□ -1.48
FDFT1P37268 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
FDFT1P37268 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.83□□□□□ -1.48
FDFT1P37268 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.83□□□□□ -1.48
FDFT1P37268 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FDFT1P37268 AGGF1P7-201ENST00000562369 913 ntBASIC5.83□□□□□ -1.48
FDFT1P37268 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.83□□□□□ -1.48
FDFT1P37268 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.83□□□□□ -1.48
FDFT1P37268 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.83□□□□□ -1.48
FDFT1P37268 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.83□□□□□ -1.48
FDFT1P37268 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.83□□□□□ -1.48
FDFT1P37268 AL591926.1-201ENST00000620542 217 ntBASIC5.83□□□□□ -1.48
FDFT1P37268 AL683826.1-201ENST00000624104 627 ntBASIC5.83□□□□□ -1.48
FDFT1P37268 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.83□□□□□ -1.48
FDFT1P37268 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms