Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXD13P35453 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
HOXD13P35453 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HOXD13P35453 AP004607.3-201ENST00000530354 3915 ntBASIC6.36□□□□□ -1.39
HOXD13P35453 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXD13P35453 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXD13P35453 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXD13P35453 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.36□□□□□ -1.39
HOXD13P35453 AL139039.2-201ENST00000407436 479 ntBASIC6.36□□□□□ -1.39
HOXD13P35453 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXD13P35453 AL034379.1-201ENST00000423216 253 ntBASIC6.36□□□□□ -1.39
HOXD13P35453 CRIP1P1-201ENST00000427567 185 ntBASIC6.36□□□□□ -1.39
HOXD13P35453 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXD13P35453 AL512637.1-201ENST00000439523 1231 ntBASIC6.36□□□□□ -1.39
HOXD13P35453 snoU13.29-201ENST00000459370 104 ntBASIC6.36□□□□□ -1.39
HOXD13P35453 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.36□□□□□ -1.39
HOXD13P35453 HMGN2P36-201ENST00000529541 409 ntBASIC6.36□□□□□ -1.39
HOXD13P35453 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HOXD13P35453 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXD13P35453 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.36□□□□□ -1.39
HOXD13P35453 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.36□□□□□ -1.39
HOXD13P35453 AC009237.12-201ENST00000604755 742 ntBASIC6.36□□□□□ -1.39
HOXD13P35453 AL133481.2-203ENST00000607558 139 ntBASIC6.36□□□□□ -1.39
HOXD13P35453 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXD13P35453 MIR1910-201ENST00000636955 80 ntBASIC6.36□□□□□ -1.39
HOXD13P35453 AC007842.1-201ENST00000597336 2039 ntBASIC6.36□□□□□ -1.39
HOXD13P35453 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXD13P35453 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXD13P35453 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXD13P35453 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXD13P35453 AC130360.2-201ENST00000533477 1556 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
HOXD13P35453 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HOXD13P35453 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXD13P35453 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
HOXD13P35453 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXD13P35453 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXD13P35453 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXD13P35453 AL159987.1-201ENST00000347911 293 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 RAB5CP1-201ENST00000395972 580 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXD13P35453 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.35□□□□□ -1.39
HOXD13P35453 RCC2P2-201ENST00000422174 918 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXD13P35453 OR5W1P-201ENST00000423705 938 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 AJ239321.1-201ENST00000424255 564 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 DEFA9P-201ENST00000433042 285 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXD13P35453 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXD13P35453 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXD13P35453 AC079080.1-201ENST00000479841 822 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 AC073610.1-201ENST00000489971 396 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 AC009120.1-201ENST00000493458 473 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXD13P35453 AC105384.2-201ENST00000508433 640 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXD13P35453 AC117525.1-201ENST00000515228 503 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXD13P35453 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXD13P35453 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXD13P35453 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXD13P35453 DPPA2P4-201ENST00000563717 878 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXD13P35453 AP001267.4-201ENST00000602598 545 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 AL031658.2-201ENST00000616850 651 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXD13P35453 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXD13P35453 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXD13P35453 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
HOXD13P35453 AC011503.2-201ENST00000594230 1500 ntBASIC6.35□□□□□ -1.39
HOXD13P35453 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXD13P35453 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HOXD13P35453 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HOXD13P35453 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXD13P35453 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXD13P35453 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXD13P35453 AC117409.1-201ENST00000470499 1310 ntBASIC6.34□□□□□ -1.39
HOXD13P35453 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXD13P35453 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXD13P35453 AL035660.1-201ENST00000422041 222 ntBASIC6.34□□□□□ -1.39
HOXD13P35453 SETP9-201ENST00000423837 832 ntBASIC6.34□□□□□ -1.39
HOXD13P35453 AC021876.1-201ENST00000425959 359 ntBASIC6.34□□□□□ -1.39
HOXD13P35453 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXD13P35453 AC242426.1-201ENST00000435270 960 ntBASIC6.34□□□□□ -1.39
HOXD13P35453 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXD13P35453 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXD13P35453 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXD13P35453 PDCL3P4-201ENST00000489621 720 ntBASIC6.34□□□□□ -1.39
HOXD13P35453 PFN1P8-201ENST00000497012 543 ntBASIC6.34□□□□□ -1.39
HOXD13P35453 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXD13P35453 AC093815.1-201ENST00000508637 280 ntBASIC6.34□□□□□ -1.39
HOXD13P35453 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXD13P35453 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HOXD13P35453 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXD13P35453 AL163952.1-202ENST00000569625 600 ntBASIC6.34□□□□□ -1.39
HOXD13P35453 FAM60CP-201ENST00000591086 664 ntBASIC6.34□□□□□ -1.39
HOXD13P35453 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXD13P35453 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXD13P35453 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms