Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 SSX2B-204ENST00000616191 1344 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
VAMP1P23763 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.51□□□□□ -1.37
VAMP1P23763 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 AC092104.1-201ENST00000497346 1441 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
VAMP1P23763 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.51□□□□□ -1.37
VAMP1P23763 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 SNORD46-201ENST00000364043 104 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
VAMP1P23763 SRSF10-206ENST00000374453 866 ntTSL 5 BASIC6.51□□□□□ -1.37
VAMP1P23763 RNU6-1042P-201ENST00000384204 107 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 RNU6-921P-201ENST00000384361 107 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
VAMP1P23763 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 AC025750.1-201ENST00000399891 379 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 ZNF603P-201ENST00000405613 487 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 AL136968.2-201ENST00000407959 354 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 MIR1296-201ENST00000408136 92 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
VAMP1P23763 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC6.51□□□□□ -1.37
VAMP1P23763 AL139128.1-201ENST00000413921 941 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 AL389915.1-201ENST00000422463 466 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 FO393418.1-201ENST00000424761 510 ntTSL 4 BASIC6.51□□□□□ -1.37
VAMP1P23763 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.51□□□□□ -1.37
VAMP1P23763 RPS26P47-201ENST00000427219 348 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.51□□□□□ -1.37
VAMP1P23763 ZYG11AP1-201ENST00000430329 837 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC6.51□□□□□ -1.37
VAMP1P23763 AC105402.2-201ENST00000438503 358 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.51□□□□□ -1.37
VAMP1P23763 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.51□□□□□ -1.37
VAMP1P23763 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.51□□□□□ -1.37
VAMP1P23763 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.51□□□□□ -1.37
VAMP1P23763 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.51□□□□□ -1.37
VAMP1P23763 SUMO2P2-201ENST00000456482 255 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 BUB3P1-201ENST00000458451 999 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 AL603882.1-201ENST00000463059 681 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC6.51□□□□□ -1.37
VAMP1P23763 AP001318.1-201ENST00000476981 321 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 TUBB3P2-201ENST00000480063 232 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 RN7SL211P-201ENST00000485246 276 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 ASS1P8-201ENST00000504437 647 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC6.51□□□□□ -1.37
VAMP1P23763 AC113430.1-201ENST00000506872 718 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.51□□□□□ -1.37
VAMP1P23763 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 AC109635.2-201ENST00000525654 524 ntTSL 3 BASIC6.51□□□□□ -1.37
VAMP1P23763 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC6.51□□□□□ -1.37
VAMP1P23763 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC6.51□□□□□ -1.37
VAMP1P23763 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC6.51□□□□□ -1.37
VAMP1P23763 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
VAMP1P23763 TUBA1C-204ENST00000549183 696 ntTSL 2 BASIC6.51□□□□□ -1.37
VAMP1P23763 AC055716.1-201ENST00000550077 495 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC6.51□□□□□ -1.37
VAMP1P23763 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC6.51□□□□□ -1.37
VAMP1P23763 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.51□□□□□ -1.37
VAMP1P23763 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC6.51□□□□□ -1.37
VAMP1P23763 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC6.51□□□□□ -1.37
VAMP1P23763 AC011477.5-201ENST00000586571 259 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC6.51□□□□□ -1.37
VAMP1P23763 AC011894.1-201ENST00000603255 456 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 AC004840.2-201ENST00000603368 285 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 AC080078.2-201ENST00000603766 501 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 AC002059.1-201ENST00000608014 477 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 AP000894.4-201ENST00000610185 483 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 AC025594.3-201ENST00000613068 790 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 TUG1_3.1-201ENST00000616187 237 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 AL354718.2-201ENST00000618030 371 ntTSL 2 BASIC6.51□□□□□ -1.37
VAMP1P23763 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.51□□□□□ -1.37
VAMP1P23763 LINC01320-209ENST00000625995 928 ntTSL 5 BASIC6.51□□□□□ -1.37
VAMP1P23763 AC183089.2-201ENST00000637931 916 ntBASIC6.51□□□□□ -1.37
VAMP1P23763 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
VAMP1P23763 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.51□□□□□ -1.37
VAMP1P23763 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.51□□□□□ -1.37
VAMP1P23763 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.51□□□□□ -1.37
VAMP1P23763 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.51□□□□□ -1.37
VAMP1P23763 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VAMP1P23763 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
VAMP1P23763 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.51□□□□□ -1.37
VAMP1P23763 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
VAMP1P23763 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
VAMP1P23763 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
VAMP1P23763 AC135352.1-201ENST00000506173 1418 ntBASIC6.5□□□□□ -1.37
VAMP1P23763 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VAMP1P23763 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms