Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH3P22223 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 AC027279.1-201ENST00000568885 4284 ntBASIC5.86□□□□□ -1.47
CDH3P22223 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH3P22223 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH3P22223 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 AC096921.2-201ENST00000561507 1916 ntBASIC5.86□□□□□ -1.47
CDH3P22223 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH3P22223 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 RNA5SP453-201ENST00000362503 119 ntBASIC5.86□□□□□ -1.47
CDH3P22223 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH3P22223 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH3P22223 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.86□□□□□ -1.47
CDH3P22223 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH3P22223 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH3P22223 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.86□□□□□ -1.47
CDH3P22223 UBE2V2P3-201ENST00000433562 437 ntBASIC5.86□□□□□ -1.47
CDH3P22223 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.86□□□□□ -1.47
CDH3P22223 AC005077.1-201ENST00000449226 375 ntBASIC5.86□□□□□ -1.47
CDH3P22223 SEPT7P3-201ENST00000455017 621 ntBASIC5.86□□□□□ -1.47
CDH3P22223 OR7L1P-201ENST00000456181 380 ntBASIC5.86□□□□□ -1.47
CDH3P22223 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 ACA64.1-201ENST00000459171 127 ntBASIC5.86□□□□□ -1.47
CDH3P22223 AC092865.4-201ENST00000477936 615 ntBASIC5.86□□□□□ -1.47
CDH3P22223 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH3P22223 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH3P22223 TRIM77BP-201ENST00000524985 1119 ntBASIC5.86□□□□□ -1.47
CDH3P22223 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH3P22223 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.86□□□□□ -1.47
CDH3P22223 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
CDH3P22223 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH3P22223 RNU4ATAC-201ENST00000580972 127 ntBASIC5.86□□□□□ -1.47
CDH3P22223 MIR4310-201ENST00000582950 57 ntBASIC5.86□□□□□ -1.47
CDH3P22223 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH3P22223 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH3P22223 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH3P22223 AC010487.1-201ENST00000594408 1172 ntBASIC5.86□□□□□ -1.47
CDH3P22223 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH3P22223 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH3P22223 AP003400.2-201ENST00000624036 666 ntBASIC5.86□□□□□ -1.47
CDH3P22223 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CDH3P22223 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH3P22223 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH3P22223 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH3P22223 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.86□□□□□ -1.47
CDH3P22223 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH3P22223 MAPK10-338ENST00000641647 3362 ntBASIC5.86□□□□□ -1.47
CDH3P22223 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH3P22223 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CDH3P22223 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH3P22223 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH3P22223 SHQ1P1-201ENST00000437111 1544 ntBASIC5.85□□□□□ -1.47
CDH3P22223 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH3P22223 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH3P22223 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH3P22223 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.85□□□□□ -1.47
CDH3P22223 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH3P22223 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
CDH3P22223 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH3P22223 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH3P22223 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH3P22223 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
CDH3P22223 SUGT1P2-201ENST00000379452 992 ntBASIC5.85□□□□□ -1.47
CDH3P22223 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH3P22223 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.85□□□□□ -1.47
CDH3P22223 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.85□□□□□ -1.47
CDH3P22223 AC066692.1-201ENST00000421721 457 ntBASIC5.85□□□□□ -1.47
CDH3P22223 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.85□□□□□ -1.47
CDH3P22223 AL365220.1-201ENST00000432923 399 ntBASIC5.85□□□□□ -1.47
CDH3P22223 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH3P22223 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH3P22223 AC016027.4-201ENST00000450866 277 ntBASIC5.85□□□□□ -1.47
CDH3P22223 RPS27AP3-201ENST00000453803 454 ntBASIC5.85□□□□□ -1.47
CDH3P22223 RAB28P2-201ENST00000454299 641 ntBASIC5.85□□□□□ -1.47
CDH3P22223 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.85□□□□□ -1.47
CDH3P22223 CST12P-201ENST00000457644 362 ntBASIC5.85□□□□□ -1.47
CDH3P22223 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH3P22223 AC083795.1-201ENST00000491760 320 ntBASIC5.85□□□□□ -1.47
CDH3P22223 AC090568.1-201ENST00000509499 856 ntBASIC5.85□□□□□ -1.47
CDH3P22223 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.85□□□□□ -1.47
CDH3P22223 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.85□□□□□ -1.47
CDH3P22223 OR5H7P-201ENST00000514084 930 ntBASIC5.85□□□□□ -1.47
CDH3P22223 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.85□□□□□ -1.47
CDH3P22223 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 286.1 ms