Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
XRCC1P18887 MTCO1P46-201ENST00000451639 1491 ntBASIC5.79□□□□□ -1.48
XRCC1P18887 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
XRCC1P18887 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
XRCC1P18887 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.79□□□□□ -1.48
XRCC1P18887 RNA5SP435-201ENST00000364044 108 ntBASIC5.79□□□□□ -1.48
XRCC1P18887 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.79□□□□□ -1.48
XRCC1P18887 RPS3AP2-201ENST00000407190 754 ntBASIC5.79□□□□□ -1.48
XRCC1P18887 EEF1B2P8-201ENST00000414101 671 ntBASIC5.79□□□□□ -1.48
XRCC1P18887 CDY17P-201ENST00000414121 1282 ntBASIC5.79□□□□□ -1.48
XRCC1P18887 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.79□□□□□ -1.48
XRCC1P18887 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.79□□□□□ -1.48
XRCC1P18887 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.79□□□□□ -1.48
XRCC1P18887 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.79□□□□□ -1.48
XRCC1P18887 AC099670.2-201ENST00000435130 321 ntBASIC5.79□□□□□ -1.48
XRCC1P18887 AL512637.1-201ENST00000439523 1231 ntBASIC5.79□□□□□ -1.48
XRCC1P18887 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.79□□□□□ -1.48
XRCC1P18887 AL445665.1-202ENST00000452436 324 ntBASIC5.79□□□□□ -1.48
XRCC1P18887 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
XRCC1P18887 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
XRCC1P18887 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.79□□□□□ -1.48
XRCC1P18887 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
XRCC1P18887 AC022826.1-201ENST00000519383 805 ntBASIC5.79□□□□□ -1.48
XRCC1P18887 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.79□□□□□ -1.48
XRCC1P18887 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.79□□□□□ -1.48
XRCC1P18887 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.79□□□□□ -1.48
XRCC1P18887 AP000619.2-201ENST00000546014 969 ntBASIC5.79□□□□□ -1.48
XRCC1P18887 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.79□□□□□ -1.48
XRCC1P18887 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.79□□□□□ -1.48
XRCC1P18887 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.79□□□□□ -1.48
XRCC1P18887 AC006530.1-201ENST00000555980 571 ntBASIC5.79□□□□□ -1.48
XRCC1P18887 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.79□□□□□ -1.48
XRCC1P18887 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.79□□□□□ -1.48
XRCC1P18887 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
XRCC1P18887 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.79□□□□□ -1.48
XRCC1P18887 AC145423.1-201ENST00000605712 336 ntBASIC5.79□□□□□ -1.48
XRCC1P18887 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.79□□□□□ -1.48
XRCC1P18887 AC079776.5-201ENST00000641920 211 ntBASIC5.79□□□□□ -1.48
XRCC1P18887 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.79□□□□□ -1.48
XRCC1P18887 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
XRCC1P18887 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
XRCC1P18887 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
XRCC1P18887 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.79□□□□□ -1.48
XRCC1P18887 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
XRCC1P18887 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
XRCC1P18887 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.79□□□□□ -1.48
XRCC1P18887 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
XRCC1P18887 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
XRCC1P18887 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.78□□□□□ -1.48
XRCC1P18887 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
XRCC1P18887 THAP12P9-201ENST00000503971 2360 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
XRCC1P18887 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
XRCC1P18887 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
XRCC1P18887 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.78□□□□□ -1.48
XRCC1P18887 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
XRCC1P18887 RN7SKP186-201ENST00000365371 303 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
XRCC1P18887 AL031985.1-201ENST00000392713 418 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 OR7E101P-201ENST00000400428 513 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 NPM1P38-201ENST00000403835 865 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 AC009506.2-201ENST00000420635 840 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
XRCC1P18887 AC099677.3-201ENST00000427081 395 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.78□□□□□ -1.48
XRCC1P18887 AC104843.2-201ENST00000427666 297 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.78□□□□□ -1.48
XRCC1P18887 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
XRCC1P18887 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.78□□□□□ -1.48
XRCC1P18887 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.78□□□□□ -1.48
XRCC1P18887 RPL7P51-201ENST00000490532 749 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 RN7SL57P-201ENST00000493687 290 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.78□□□□□ -1.48
XRCC1P18887 GAPDHP71-201ENST00000511530 1003 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.78□□□□□ -1.48
XRCC1P18887 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.78□□□□□ -1.48
XRCC1P18887 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
XRCC1P18887 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
XRCC1P18887 AC079600.1-201ENST00000550326 297 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.78□□□□□ -1.48
XRCC1P18887 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.78□□□□□ -1.48
XRCC1P18887 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.78□□□□□ -1.48
XRCC1P18887 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
XRCC1P18887 AC008521.2-201ENST00000591021 259 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.78□□□□□ -1.48
XRCC1P18887 AC091305.2-201ENST00000624049 1576 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
XRCC1P18887 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.78□□□□□ -1.48
XRCC1P18887 OR8G3P-202ENST00000641572 1255 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 DNM1P47-203ENST00000571780 12667 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.78□□□□□ -1.48
XRCC1P18887 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
XRCC1P18887 PDZK1P1-202ENST00000425209 1350 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
XRCC1P18887 AC093671.1-201ENST00000624981 2929 ntBASIC5.78□□□□□ -1.48
XRCC1P18887 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
XRCC1P18887 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.77□□□□□ -1.48
XRCC1P18887 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
XRCC1P18887 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
XRCC1P18887 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms