Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC051619.2-201ENST00000559063 397 ntBASIC5.86□□□□□ -1.47
HMGA1P17096 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGA1P17096 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGA1P17096 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGA1P17096 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGA1P17096 AC136428.4-201ENST00000634254 1155 ntBASIC5.86□□□□□ -1.47
HMGA1P17096 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGA1P17096 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGA1P17096 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGA1P17096 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
HMGA1P17096 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
HMGA1P17096 AC068769.1-201ENST00000474767 2426 ntBASIC5.86□□□□□ -1.47
HMGA1P17096 MELK-211ENST00000545008 2236 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGA1P17096 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGA1P17096 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGA1P17096 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGA1P17096 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGA1P17096 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGA1P17096 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGA1P17096 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGA1P17096 AL117378.2-201ENST00000622916 1337 ntBASIC5.85□□□□□ -1.47
HMGA1P17096 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGA1P17096 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGA1P17096 Z93019.1-201ENST00000416450 973 ntBASIC5.85□□□□□ -1.47
HMGA1P17096 MEMO1P4-201ENST00000453590 386 ntBASIC5.85□□□□□ -1.47
HMGA1P17096 RPL7P45-201ENST00000455851 743 ntBASIC5.85□□□□□ -1.47
HMGA1P17096 RN7SL51P-201ENST00000468230 285 ntBASIC5.85□□□□□ -1.47
HMGA1P17096 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.85□□□□□ -1.47
HMGA1P17096 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
HMGA1P17096 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGA1P17096 AP001804.1-201ENST00000526868 919 ntBASIC5.85□□□□□ -1.47
HMGA1P17096 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGA1P17096 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HMGA1P17096 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.85□□□□□ -1.47
HMGA1P17096 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGA1P17096 HIRAP1-201ENST00000605318 787 ntBASIC5.85□□□□□ -1.47
HMGA1P17096 AC000068.2-201ENST00000608816 460 ntBASIC5.85□□□□□ -1.47
HMGA1P17096 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.85□□□□□ -1.47
HMGA1P17096 MIR6837-201ENST00000620884 64 ntBASIC5.85□□□□□ -1.47
HMGA1P17096 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.85□□□□□ -1.47
HMGA1P17096 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HMGA1P17096 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.85□□□□□ -1.47
HMGA1P17096 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGA1P17096 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HMGA1P17096 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGA1P17096 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGA1P17096 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HMGA1P17096 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGA1P17096 PABPC1P6-201ENST00000445594 1829 ntBASIC5.85□□□□□ -1.47
HMGA1P17096 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
HMGA1P17096 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGA1P17096 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
HMGA1P17096 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGA1P17096 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGA1P17096 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HMGA1P17096 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGA1P17096 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGA1P17096 AL590763.1-201ENST00000398297 1545 ntBASIC5.84□□□□□ -1.47
HMGA1P17096 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGA1P17096 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGA1P17096 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGA1P17096 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGA1P17096 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGA1P17096 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
HMGA1P17096 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGA1P17096 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
HMGA1P17096 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGA1P17096 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGA1P17096 RN7SKP6-201ENST00000364795 319 ntBASIC5.84□□□□□ -1.47
HMGA1P17096 RNU1-59P-201ENST00000364829 162 ntBASIC5.84□□□□□ -1.47
HMGA1P17096 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HMGA1P17096 RN7SKP279-201ENST00000411383 298 ntBASIC5.84□□□□□ -1.47
HMGA1P17096 DPPA2P3-201ENST00000411853 655 ntBASIC5.84□□□□□ -1.47
HMGA1P17096 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.84□□□□□ -1.47
HMGA1P17096 AL596266.1-201ENST00000448132 400 ntBASIC5.84□□□□□ -1.47
HMGA1P17096 RPS26P41-201ENST00000450370 284 ntBASIC5.84□□□□□ -1.47
HMGA1P17096 AL606490.1-201ENST00000452266 765 ntBASIC5.84□□□□□ -1.47
HMGA1P17096 RPL12P39-201ENST00000455456 496 ntBASIC5.84□□□□□ -1.47
HMGA1P17096 RN7SL515P-201ENST00000463999 297 ntBASIC5.84□□□□□ -1.47
HMGA1P17096 PGAM1P13-201ENST00000507497 754 ntBASIC5.84□□□□□ -1.47
HMGA1P17096 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.84□□□□□ -1.47
HMGA1P17096 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGA1P17096 U1.25-201ENST00000614085 162 ntBASIC5.84□□□□□ -1.47
HMGA1P17096 AC016769.4-201ENST00000616893 535 ntBASIC5.84□□□□□ -1.47
HMGA1P17096 U1.34-201ENST00000618578 162 ntBASIC5.84□□□□□ -1.47
HMGA1P17096 U1.31-201ENST00000620022 160 ntBASIC5.84□□□□□ -1.47
HMGA1P17096 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGA1P17096 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGA1P17096 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.84□□□□□ -1.47
HMGA1P17096 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.84□□□□□ -1.47
HMGA1P17096 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.84□□□□□ -1.47
HMGA1P17096 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGA1P17096 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGA1P17096 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
HMGA1P17096 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HMGA1P17096 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGA1P17096 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGA1P17096 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGA1P17096 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HMGA1P17096 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms