Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
KRT3P12035 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
KRT3P12035 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
KRT3P12035 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRT3P12035 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
KRT3P12035 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRT3P12035 AC140134.1-201ENST00000511830 3544 ntBASIC6.08□□□□□ -1.44
KRT3P12035 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
KRT3P12035 SUGT1P2-201ENST00000379452 992 ntBASIC6.08□□□□□ -1.44
KRT3P12035 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
KRT3P12035 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.08□□□□□ -1.44
KRT3P12035 RN7SKP279-201ENST00000411383 298 ntBASIC6.08□□□□□ -1.44
KRT3P12035 MRPL53P1-201ENST00000414323 319 ntBASIC6.08□□□□□ -1.44
KRT3P12035 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.08□□□□□ -1.44
KRT3P12035 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.08□□□□□ -1.44
KRT3P12035 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT3P12035 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT3P12035 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT3P12035 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT3P12035 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT3P12035 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT3P12035 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT3P12035 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT3P12035 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT3P12035 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT3P12035 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.08□□□□□ -1.44
KRT3P12035 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT3P12035 AC107958.1-201ENST00000556576 290 ntBASIC6.08□□□□□ -1.44
KRT3P12035 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.08□□□□□ -1.44
KRT3P12035 FAM27E4-201ENST00000605259 342 ntBASIC6.08□□□□□ -1.44
KRT3P12035 NANOGP3-201ENST00000605855 286 ntBASIC6.08□□□□□ -1.44
KRT3P12035 AC093388.1-201ENST00000609166 430 ntBASIC6.08□□□□□ -1.44
KRT3P12035 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.08□□□□□ -1.44
KRT3P12035 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.08□□□□□ -1.44
KRT3P12035 AC025262.3-201ENST00000623666 360 ntBASIC6.08□□□□□ -1.44
KRT3P12035 AC132825.8-201ENST00000640783 297 ntBASIC6.08□□□□□ -1.44
KRT3P12035 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRT3P12035 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRT3P12035 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
KRT3P12035 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
KRT3P12035 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRT3P12035 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.07□□□□□ -1.44
KRT3P12035 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT3P12035 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
KRT3P12035 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.07□□□□□ -1.44
KRT3P12035 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRT3P12035 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
KRT3P12035 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.07□□□□□ -1.44
KRT3P12035 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT3P12035 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT3P12035 RNA5SP500-201ENST00000364486 119 ntBASIC6.07□□□□□ -1.44
KRT3P12035 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
KRT3P12035 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
KRT3P12035 VN1R12P-201ENST00000403778 876 ntBASIC6.07□□□□□ -1.44
KRT3P12035 RN7SKP17-201ENST00000411242 351 ntBASIC6.07□□□□□ -1.44
KRT3P12035 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.07□□□□□ -1.44
KRT3P12035 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.07□□□□□ -1.44
KRT3P12035 MRPS21P2-201ENST00000424704 264 ntBASIC6.07□□□□□ -1.44
KRT3P12035 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRT3P12035 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
KRT3P12035 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.07□□□□□ -1.44
KRT3P12035 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.07□□□□□ -1.44
KRT3P12035 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
KRT3P12035 OR7E116P-201ENST00000448529 957 ntBASIC6.07□□□□□ -1.44
KRT3P12035 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.07□□□□□ -1.44
KRT3P12035 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRT3P12035 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.07□□□□□ -1.44
KRT3P12035 AC090058.1-201ENST00000498788 435 ntBASIC6.07□□□□□ -1.44
KRT3P12035 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.07□□□□□ -1.44
KRT3P12035 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.07□□□□□ -1.44
KRT3P12035 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.07□□□□□ -1.44
KRT3P12035 IGLV3-30-201ENST00000524362 298 ntBASIC6.07□□□□□ -1.44
KRT3P12035 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.07□□□□□ -1.44
KRT3P12035 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.07□□□□□ -1.44
KRT3P12035 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.07□□□□□ -1.44
KRT3P12035 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.07□□□□□ -1.44
KRT3P12035 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
KRT3P12035 MIR4260-201ENST00000583107 67 ntBASIC6.07□□□□□ -1.44
KRT3P12035 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.07□□□□□ -1.44
KRT3P12035 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.07□□□□□ -1.44
KRT3P12035 HIRAP1-201ENST00000605318 787 ntBASIC6.07□□□□□ -1.44
KRT3P12035 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.07□□□□□ -1.44
KRT3P12035 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.07□□□□□ -1.44
KRT3P12035 AC138627.1-204ENST00000641894 765 ntBASIC6.07□□□□□ -1.44
KRT3P12035 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT3P12035 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRT3P12035 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT3P12035 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
KRT3P12035 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
KRT3P12035 AL442128.2-201ENST00000620246 1824 ntBASIC6.06□□□□□ -1.44
KRT3P12035 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
KRT3P12035 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.06□□□□□ -1.44
KRT3P12035 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.06□□□□□ -1.44
KRT3P12035 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
KRT3P12035 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.06□□□□□ -1.44
KRT3P12035 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRT3P12035 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRT3P12035 U3.10-201ENST00000364459 214 ntBASIC6.06□□□□□ -1.44
KRT3P12035 RN7SKP275-201ENST00000364626 301 ntBASIC6.06□□□□□ -1.44
KRT3P12035 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms