Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.88□□□□□ -1.47
PCNAP12004 AC087516.1-201ENST00000561236 2428 ntBASIC5.88□□□□□ -1.47
PCNAP12004 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCNAP12004 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.88□□□□□ -1.47
PCNAP12004 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.88□□□□□ -1.47
PCNAP12004 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCNAP12004 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
PCNAP12004 CDC27P2-201ENST00000425026 1922 ntBASIC5.87□□□□□ -1.47
PCNAP12004 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCNAP12004 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCNAP12004 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCNAP12004 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCNAP12004 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.87□□□□□ -1.47
PCNAP12004 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PCNAP12004 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PCNAP12004 MAPK10-338ENST00000641647 3362 ntBASIC5.87□□□□□ -1.47
PCNAP12004 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCNAP12004 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.87□□□□□ -1.47
PCNAP12004 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.87□□□□□ -1.47
PCNAP12004 AL132875.1-201ENST00000403623 949 ntBASIC5.87□□□□□ -1.47
PCNAP12004 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.87□□□□□ -1.47
PCNAP12004 AC013470.3-201ENST00000420252 1194 ntBASIC5.87□□□□□ -1.47
PCNAP12004 AL139158.1-201ENST00000424719 340 ntBASIC5.87□□□□□ -1.47
PCNAP12004 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.87□□□□□ -1.47
PCNAP12004 AL445528.1-201ENST00000426330 420 ntBASIC5.87□□□□□ -1.47
PCNAP12004 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.87□□□□□ -1.47
PCNAP12004 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.87□□□□□ -1.47
PCNAP12004 AL731534.1-201ENST00000434711 269 ntBASIC5.87□□□□□ -1.47
PCNAP12004 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.87□□□□□ -1.47
PCNAP12004 MRPS33P4-201ENST00000434892 317 ntBASIC5.87□□□□□ -1.47
PCNAP12004 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.87□□□□□ -1.47
PCNAP12004 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.87□□□□□ -1.47
PCNAP12004 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCNAP12004 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.87□□□□□ -1.47
PCNAP12004 AC073476.1-201ENST00000452854 407 ntBASIC5.87□□□□□ -1.47
PCNAP12004 SEPT7P3-201ENST00000455017 621 ntBASIC5.87□□□□□ -1.47
PCNAP12004 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.87□□□□□ -1.47
PCNAP12004 AL035690.1-201ENST00000490892 383 ntBASIC5.87□□□□□ -1.47
PCNAP12004 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.87□□□□□ -1.47
PCNAP12004 RNU6-760P-201ENST00000516078 97 ntBASIC5.87□□□□□ -1.47
PCNAP12004 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.87□□□□□ -1.47
PCNAP12004 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
PCNAP12004 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.87□□□□□ -1.47
PCNAP12004 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.87□□□□□ -1.47
PCNAP12004 ARGFXP2-201ENST00000579304 949 ntBASIC5.87□□□□□ -1.47
PCNAP12004 RN7SL230P-201ENST00000580835 303 ntBASIC5.87□□□□□ -1.47
PCNAP12004 AL135999.3-201ENST00000610501 812 ntBASIC5.87□□□□□ -1.47
PCNAP12004 uc_338.29-201ENST00000615099 168 ntBASIC5.87□□□□□ -1.47
PCNAP12004 AP002371.2-201ENST00000624450 503 ntBASIC5.87□□□□□ -1.47
PCNAP12004 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCNAP12004 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.87□□□□□ -1.47
PCNAP12004 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.87□□□□□ -1.47
PCNAP12004 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PCNAP12004 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCNAP12004 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.87□□□□□ -1.47
PCNAP12004 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCNAP12004 AC097461.1-201ENST00000568928 2821 ntBASIC5.87□□□□□ -1.47
PCNAP12004 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCNAP12004 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.87□□□□□ -1.47
PCNAP12004 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCNAP12004 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCNAP12004 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PCNAP12004 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PCNAP12004 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.86□□□□□ -1.47
PCNAP12004 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.86□□□□□ -1.47
PCNAP12004 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PCNAP12004 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCNAP12004 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCNAP12004 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCNAP12004 AF287957.1-201ENST00000607368 1595 ntBASIC5.86□□□□□ -1.47
PCNAP12004 LYARP1-201ENST00000436977 1501 ntBASIC5.86□□□□□ -1.47
PCNAP12004 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.86□□□□□ -1.47
PCNAP12004 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCNAP12004 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.86□□□□□ -1.47
PCNAP12004 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCNAP12004 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCNAP12004 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCNAP12004 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCNAP12004 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
PCNAP12004 RAB5CP1-201ENST00000395972 580 ntBASIC5.86□□□□□ -1.47
PCNAP12004 UBE2V1P15-201ENST00000407776 448 ntBASIC5.86□□□□□ -1.47
PCNAP12004 PRUNEP1-201ENST00000425846 705 ntBASIC5.86□□□□□ -1.47
PCNAP12004 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.86□□□□□ -1.47
PCNAP12004 RAB9AP5-201ENST00000437794 597 ntBASIC5.86□□□□□ -1.47
PCNAP12004 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.86□□□□□ -1.47
PCNAP12004 RAB9AP2-201ENST00000443911 597 ntBASIC5.86□□□□□ -1.47
PCNAP12004 AL590004.3-202ENST00000445883 451 ntBASIC5.86□□□□□ -1.47
PCNAP12004 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.86□□□□□ -1.47
PCNAP12004 OR7E22P-201ENST00000478335 1035 ntBASIC5.86□□□□□ -1.47
PCNAP12004 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.86□□□□□ -1.47
PCNAP12004 AC108103.1-201ENST00000511286 446 ntBASIC5.86□□□□□ -1.47
PCNAP12004 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.86□□□□□ -1.47
PCNAP12004 HMGN1P17-201ENST00000513734 295 ntBASIC5.86□□□□□ -1.47
PCNAP12004 NPM1P52-201ENST00000518264 846 ntBASIC5.86□□□□□ -1.47
PCNAP12004 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.86□□□□□ -1.47
PCNAP12004 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCNAP12004 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.86□□□□□ -1.47
PCNAP12004 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCNAP12004 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.86□□□□□ -1.47
PCNAP12004 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms