Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 GTF2IP4-201ENST00000453092 2054 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC6P09630 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC6P09630 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC6P09630 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXC6P09630 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC6P09630 AC009831.5-201ENST00000624000 3189 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 CASC19-243ENST00000641588 1546 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXC6P09630 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXC6P09630 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXC6P09630 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
HOXC6P09630 MRRFP1-201ENST00000435941 1675 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXC6P09630 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXC6P09630 AC240504.1-201ENST00000395709 845 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
HOXC6P09630 AL645927.1-201ENST00000396783 406 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 RMRPP5-201ENST00000411156 267 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.56□□□□□ -1.36
HOXC6P09630 AC015977.1-201ENST00000418887 292 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXC6P09630 AL133173.1-201ENST00000423458 397 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 AL139148.1-201ENST00000427122 680 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HOXC6P09630 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXC6P09630 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXC6P09630 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.56□□□□□ -1.36
HOXC6P09630 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXC6P09630 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HOXC6P09630 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
HOXC6P09630 AL450023.1-201ENST00000450868 751 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXC6P09630 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXC6P09630 HIGD1AP14-201ENST00000507617 282 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXC6P09630 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXC6P09630 HAUS8P1-201ENST00000549005 542 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.56□□□□□ -1.36
HOXC6P09630 AC096996.1-201ENST00000563813 325 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.56□□□□□ -1.36
HOXC6P09630 AP005901.4-201ENST00000577336 569 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
HOXC6P09630 AL390318.1-201ENST00000624564 687 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXC6P09630 AC119674.1-217ENST00000641942 1086 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HOXC6P09630 OFD1P17-201ENST00000437639 3018 ntBASIC6.56□□□□□ -1.36
HOXC6P09630 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
HOXC6P09630 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
HOXC6P09630 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.55□□□□□ -1.36
HOXC6P09630 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HOXC6P09630 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXC6P09630 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC6P09630 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.55□□□□□ -1.36
HOXC6P09630 AL117378.2-201ENST00000622916 1337 ntBASIC6.55□□□□□ -1.36
HOXC6P09630 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
HOXC6P09630 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC6P09630 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC6P09630 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC6P09630 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXC6P09630 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.55□□□□□ -1.36
HOXC6P09630 RNA5SP443-201ENST00000363083 132 ntBASIC6.55□□□□□ -1.36
HOXC6P09630 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXC6P09630 MIR223-201ENST00000385204 110 ntBASIC6.55□□□□□ -1.36
HOXC6P09630 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HOXC6P09630 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.55□□□□□ -1.36
HOXC6P09630 SLC35E1P1-201ENST00000419313 864 ntBASIC6.55□□□□□ -1.36
HOXC6P09630 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.55□□□□□ -1.36
HOXC6P09630 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.55□□□□□ -1.36
HOXC6P09630 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXC6P09630 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.55□□□□□ -1.36
HOXC6P09630 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.55□□□□□ -1.36
HOXC6P09630 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.55□□□□□ -1.36
HOXC6P09630 OTX2P1-201ENST00000450956 354 ntBASIC6.55□□□□□ -1.36
HOXC6P09630 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.55□□□□□ -1.36
HOXC6P09630 ACA64.4-201ENST00000459070 127 ntBASIC6.55□□□□□ -1.36
HOXC6P09630 RN7SL172P-201ENST00000460535 303 ntBASIC6.55□□□□□ -1.36
HOXC6P09630 RPL7P39-201ENST00000481157 744 ntBASIC6.55□□□□□ -1.36
HOXC6P09630 SNORA48.9-201ENST00000516419 162 ntBASIC6.55□□□□□ -1.36
HOXC6P09630 RNU6-362P-201ENST00000516736 90 ntBASIC6.55□□□□□ -1.36
HOXC6P09630 CDC42P3-201ENST00000518493 633 ntBASIC6.55□□□□□ -1.36
HOXC6P09630 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.55□□□□□ -1.36
HOXC6P09630 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.55□□□□□ -1.36
HOXC6P09630 AC004825.1-201ENST00000555068 586 ntBASIC6.55□□□□□ -1.36
HOXC6P09630 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.55□□□□□ -1.36
HOXC6P09630 AC105036.1-201ENST00000566222 271 ntBASIC6.55□□□□□ -1.36
HOXC6P09630 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXC6P09630 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.55□□□□□ -1.36
HOXC6P09630 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXC6P09630 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXC6P09630 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXC6P09630 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.55□□□□□ -1.36
HOXC6P09630 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXC6P09630 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC6P09630 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXC6P09630 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
HOXC6P09630 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC6P09630 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms