Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC6.97□□□□□ -1.29
HLA-DOAP06340 AL161901.1-201ENST00000624954 3425 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.97□□□□□ -1.29
HLA-DOAP06340 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
HLA-DOAP06340 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.97□□□□□ -1.29
HLA-DOAP06340 MIR143-201ENST00000385300 106 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 HMGB1P20-201ENST00000402555 677 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 NME1P1-201ENST00000420914 382 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 AL121776.1-201ENST00000429337 372 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 UBE2V1P6-201ENST00000430840 422 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 ZFAND6P1-201ENST00000434138 605 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.97□□□□□ -1.29
HLA-DOAP06340 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.97□□□□□ -1.29
HLA-DOAP06340 AL162739.1-201ENST00000450606 307 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 LRRC37A14P-201ENST00000452297 462 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 PFN1P6-201ENST00000476786 399 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 AC025181.1-201ENST00000477507 416 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 AC022215.1-201ENST00000481770 362 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC6.97□□□□□ -1.29
HLA-DOAP06340 SNORA81.2-201ENST00000516868 170 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.97□□□□□ -1.29
HLA-DOAP06340 AC090651.1-201ENST00000567865 634 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.97□□□□□ -1.29
HLA-DOAP06340 MIR132-201ENST00000591554 101 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 AC092944.2-201ENST00000605443 889 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 AL445670.1-201ENST00000618889 801 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.97□□□□□ -1.29
HLA-DOAP06340 AC008993.2-201ENST00000631744 806 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.97□□□□□ -1.29
HLA-DOAP06340 OR11H2-202ENST00000641517 1085 ntBASIC6.97□□□□□ -1.29
HLA-DOAP06340 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-DOAP06340 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.97□□□□□ -1.29
HLA-DOAP06340 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-DOAP06340 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
HLA-DOAP06340 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-DOAP06340 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.29
HLA-DOAP06340 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.96□□□□□ -1.29
HLA-DOAP06340 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
HLA-DOAP06340 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HLA-DOAP06340 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HLA-DOAP06340 DNM1P47-203ENST00000571780 12667 ntBASIC6.96□□□□□ -1.29
HLA-DOAP06340 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.96□□□□□ -1.29
HLA-DOAP06340 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HLA-DOAP06340 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
HLA-DOAP06340 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
HLA-DOAP06340 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HLA-DOAP06340 RNA5SP46-201ENST00000362370 120 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 RNA5SP394-201ENST00000364216 119 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HLA-DOAP06340 U3.25-201ENST00000391209 220 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.3
HLA-DOAP06340 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.96□□□□□ -1.3
HLA-DOAP06340 TMA16P2-201ENST00000413187 601 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 OR51A6P-201ENST00000418680 1004 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HLA-DOAP06340 AC016027.5-201ENST00000427227 210 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 AC002504.1-201ENST00000438281 691 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 AC023141.8-201ENST00000442554 208 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 CUBNP2-201ENST00000443534 1139 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HLA-DOAP06340 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC6.96□□□□□ -1.3
HLA-DOAP06340 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC6.96□□□□□ -1.3
HLA-DOAP06340 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.96□□□□□ -1.3
HLA-DOAP06340 AC026407.1-201ENST00000518369 204 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.96□□□□□ -1.3
HLA-DOAP06340 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.96□□□□□ -1.3
HLA-DOAP06340 AC008507.2-201ENST00000588402 1176 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 AC245884.10-201ENST00000597355 337 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 AC112503.2-201ENST00000609005 552 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 AC016597.2-201ENST00000613256 341 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 AL137246.2-201ENST00000613439 662 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.96□□□□□ -1.3
HLA-DOAP06340 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.96□□□□□ -1.3
HLA-DOAP06340 MAPK10-350ENST00000641777 965 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
HLA-DOAP06340 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.96□□□□□ -1.3
HLA-DOAP06340 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.96□□□□□ -1.3
HLA-DOAP06340 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
HLA-DOAP06340 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HLA-DOAP06340 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HLA-DOAP06340 AL592494.2-201ENST00000425455 1548 ntBASIC6.96□□□□□ -1.3
HLA-DOAP06340 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
HLA-DOAP06340 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HLA-DOAP06340 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HLA-DOAP06340 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HLA-DOAP06340 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HLA-DOAP06340 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HLA-DOAP06340 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HLA-DOAP06340 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HLA-DOAP06340 RNU6-891P-201ENST00000384280 111 ntBASIC6.95□□□□□ -1.3
HLA-DOAP06340 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HLA-DOAP06340 AL357078.2-201ENST00000416486 427 ntBASIC6.95□□□□□ -1.3
HLA-DOAP06340 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 AL731534.1-201ENST00000434711 269 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms