Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.12□□□□□ -1.27
PDGFAP04085 MT-RNR2-201ENST00000387347 1559 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
PDGFAP04085 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC7.12□□□□□ -1.27
PDGFAP04085 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
PDGFAP04085 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.12□□□□□ -1.27
PDGFAP04085 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
PDGFAP04085 RNA5SP185-201ENST00000390963 114 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 TMSB4XP8-201ENST00000402089 135 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC7.12□□□□□ -1.27
PDGFAP04085 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.12□□□□□ -1.27
PDGFAP04085 SNORA11D-201ENST00000408548 128 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 SNORA11E-201ENST00000408778 128 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 RN7SKP137-201ENST00000411074 307 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.12□□□□□ -1.27
PDGFAP04085 TMSB4XP6-201ENST00000415187 135 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 PGAM1P3-201ENST00000420790 565 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 TMSB4XP1-201ENST00000424567 135 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.12□□□□□ -1.27
PDGFAP04085 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.12□□□□□ -1.27
PDGFAP04085 AC002069.1-201ENST00000429649 1159 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
PDGFAP04085 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 RPL21P110-201ENST00000433345 446 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
PDGFAP04085 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC7.12□□□□□ -1.27
PDGFAP04085 AC099344.1-201ENST00000433548 492 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC7.12□□□□□ -1.27
PDGFAP04085 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC7.12□□□□□ -1.27
PDGFAP04085 AC098614.3-201ENST00000438957 440 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC7.12□□□□□ -1.27
PDGFAP04085 COX6CP18-201ENST00000448769 222 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC7.12□□□□□ -1.27
PDGFAP04085 TREML3P-201ENST00000457327 501 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.12□□□□□ -1.27
PDGFAP04085 RPS4XP19-201ENST00000460237 736 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 AC234782.3-201ENST00000461229 433 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.12□□□□□ -1.27
PDGFAP04085 TRBV8-2-201ENST00000475637 270 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 RN7SL635P-201ENST00000492123 296 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 RN7SL516P-201ENST00000496127 297 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC7.12□□□□□ -1.27
PDGFAP04085 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.12□□□□□ -1.27
PDGFAP04085 AC008802.1-201ENST00000519121 791 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.12□□□□□ -1.27
PDGFAP04085 OR4R3P-201ENST00000525084 838 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
PDGFAP04085 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC7.12□□□□□ -1.27
PDGFAP04085 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC7.12□□□□□ -1.27
PDGFAP04085 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.12□□□□□ -1.27
PDGFAP04085 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC7.12□□□□□ -1.27
PDGFAP04085 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7.12□□□□□ -1.27
PDGFAP04085 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
PDGFAP04085 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC7.12□□□□□ -1.27
PDGFAP04085 RN7SL473P-201ENST00000580341 299 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 MIR548Y-201ENST00000582739 110 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC7.12□□□□□ -1.27
PDGFAP04085 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.12□□□□□ -1.27
PDGFAP04085 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 AC007014.2-201ENST00000615581 479 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 AC099654.14-201ENST00000638599 341 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
PDGFAP04085 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
PDGFAP04085 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.12□□□□□ -1.27
PDGFAP04085 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 CCT8P1-201ENST00000413611 1657 ntBASIC7.12□□□□□ -1.27
PDGFAP04085 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDGFAP04085 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.11□□□□□ -1.27
PDGFAP04085 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.11□□□□□ -1.27
PDGFAP04085 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.11□□□□□ -1.27
PDGFAP04085 EED-206ENST00000527888 1422 ntTSL 2 BASIC7.11□□□□□ -1.27
PDGFAP04085 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC7.11□□□□□ -1.27
PDGFAP04085 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.11□□□□□ -1.27
PDGFAP04085 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 AC092725.2-201ENST00000567658 1389 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
PDGFAP04085 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms