Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 SNORD116-30-201ENST00000516468 85 ntBASIC8.63□□□□□ -1.03
RAPGEF3O95398 OR5AZ1P-201ENST00000527448 943 ntBASIC8.63□□□□□ -1.03
RAPGEF3O95398 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RAPGEF3O95398 BRD9P1-201ENST00000529855 560 ntBASIC8.63□□□□□ -1.03
RAPGEF3O95398 AC092451.2-201ENST00000538746 658 ntBASIC8.63□□□□□ -1.03
RAPGEF3O95398 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RAPGEF3O95398 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RAPGEF3O95398 TNPO1P2-201ENST00000426249 2665 ntBASIC8.63□□□□□ -1.03
RAPGEF3O95398 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RAPGEF3O95398 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RAPGEF3O95398 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RAPGEF3O95398 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.62□□□□□ -1.03
RAPGEF3O95398 RNU1-43P-201ENST00000365052 165 ntBASIC8.62□□□□□ -1.03
RAPGEF3O95398 OR6K3-202ENST00000368146 996 ntBASIC8.62□□□□□ -1.03
RAPGEF3O95398 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC8.62□□□□□ -1.03
RAPGEF3O95398 NIFKP3-201ENST00000417799 865 ntBASIC8.62□□□□□ -1.03
RAPGEF3O95398 RBMY2QP-201ENST00000429799 1147 ntBASIC8.62□□□□□ -1.03
RAPGEF3O95398 AC006335.2-201ENST00000437993 330 ntBASIC8.62□□□□□ -1.03
RAPGEF3O95398 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC8.62□□□□□ -1.03
RAPGEF3O95398 AC009963.2-201ENST00000453431 138 ntBASIC8.62□□□□□ -1.03
RAPGEF3O95398 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC8.62□□□□□ -1.03
RAPGEF3O95398 ACA64.4-201ENST00000459070 127 ntBASIC8.62□□□□□ -1.03
RAPGEF3O95398 RN7SL352P-201ENST00000466002 277 ntBASIC8.62□□□□□ -1.03
RAPGEF3O95398 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RAPGEF3O95398 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC8.62□□□□□ -1.03
RAPGEF3O95398 PRELID3BP5-201ENST00000508612 460 ntBASIC8.62□□□□□ -1.03
RAPGEF3O95398 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC8.62□□□□□ -1.03
RAPGEF3O95398 AL512310.9-201ENST00000553311 948 ntBASIC8.62□□□□□ -1.03
RAPGEF3O95398 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RAPGEF3O95398 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
RAPGEF3O95398 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
RAPGEF3O95398 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC8.62□□□□□ -1.03
RAPGEF3O95398 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC8.62□□□□□ -1.03
RAPGEF3O95398 AC010435.1-201ENST00000623353 1177 ntBASIC8.62□□□□□ -1.03
RAPGEF3O95398 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
RAPGEF3O95398 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
RAPGEF3O95398 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
RAPGEF3O95398 AP004289.1-201ENST00000436307 2205 ntBASIC8.61□□□□□ -1.03
RAPGEF3O95398 HYDIN2-203ENST00000614586 13885 ntBASIC8.61□□□□□ -1.03
RAPGEF3O95398 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC8.61□□□□□ -1.03
RAPGEF3O95398 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RAPGEF3O95398 RNU4-4P-201ENST00000364588 130 ntBASIC8.61□□□□□ -1.03
RAPGEF3O95398 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RAPGEF3O95398 CAV1-204ENST00000393470 598 ntTSL 4 BASIC8.61□□□□□ -1.03
RAPGEF3O95398 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC8.61□□□□□ -1.03
RAPGEF3O95398 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC8.61□□□□□ -1.03
RAPGEF3O95398 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC8.61□□□□□ -1.03
RAPGEF3O95398 AC024451.1-201ENST00000508013 779 ntBASIC8.61□□□□□ -1.03
RAPGEF3O95398 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC8.61□□□□□ -1.03
RAPGEF3O95398 BNIP3P1-201ENST00000547295 580 ntBASIC8.61□□□□□ -1.03
RAPGEF3O95398 MIR3934-201ENST00000579806 107 ntBASIC8.61□□□□□ -1.03
RAPGEF3O95398 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC8.61□□□□□ -1.03
RAPGEF3O95398 AC138473.1-201ENST00000605717 526 ntBASIC8.61□□□□□ -1.03
RAPGEF3O95398 AL138960.2-201ENST00000625145 535 ntBASIC8.61□□□□□ -1.03
RAPGEF3O95398 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
RAPGEF3O95398 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC8.61□□□□□ -1.03
RAPGEF3O95398 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.61□□□□□ -1.03
RAPGEF3O95398 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
RAPGEF3O95398 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.61□□□□□ -1.03
RAPGEF3O95398 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
RAPGEF3O95398 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC8.61□□□□□ -1.03
RAPGEF3O95398 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RAPGEF3O95398 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
RAPGEF3O95398 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
RAPGEF3O95398 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
RAPGEF3O95398 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RAPGEF3O95398 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RAPGEF3O95398 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
RAPGEF3O95398 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
RAPGEF3O95398 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
RAPGEF3O95398 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
RAPGEF3O95398 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RAPGEF3O95398 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 U3.36-201ENST00000408418 213 ntBASIC8.6□□□□□ -1.03
RAPGEF3O95398 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 MYL6P5-201ENST00000412707 459 ntBASIC8.6□□□□□ -1.03
RAPGEF3O95398 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RAPGEF3O95398 XKRYP6-201ENST00000440468 1116 ntBASIC8.6□□□□□ -1.03
RAPGEF3O95398 XKRYP3-201ENST00000442113 1116 ntBASIC8.6□□□□□ -1.03
RAPGEF3O95398 RAD1P2-201ENST00000446414 663 ntBASIC8.6□□□□□ -1.03
RAPGEF3O95398 RPS3AP53-201ENST00000454716 778 ntBASIC8.6□□□□□ -1.03
RAPGEF3O95398 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 RN7SL591P-201ENST00000496150 292 ntBASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms