Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AL161636.2-201ENST00000445179 927 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AL359955.2-201ENST00000445380 353 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 RPL36AP39-201ENST00000445859 318 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 UBFD1P1-201ENST00000473259 814 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AC124945.1-201ENST00000485133 188 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AC020937.1-201ENST00000519677 1013 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 TPM3P3-201ENST00000521343 354 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 ZNF322P1-201ENST00000568013 1209 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AP001542.1-201ENST00000591314 200 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 Z95327.3-201ENST00000610385 572 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AL357562.1-201ENST00000624911 609 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AP002512.4-202ENST00000641599 4530 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AC233968.1-201ENST00000611212 1300 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 DDX18P6-201ENST00000450119 1997 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 WDR95P-201ENST00000425638 1542 ntBASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 NEPNP-201ENST00000404786 1371 ntBASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 RNF19BPY-201ENST00000458209 1550 ntBASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 OR10R3P-201ENST00000361688 942 ntBASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 MIR323A-201ENST00000362199 86 ntBASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 AC245060.4-201ENST00000413293 1121 ntBASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 CDY17P-201ENST00000414121 1282 ntBASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 CYP4F27P-201ENST00000514557 494 ntBASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 AC112191.2-201ENST00000522428 333 ntBASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 AP001804.1-201ENST00000526868 919 ntBASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 PCNAP4-201ENST00000532690 730 ntBASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 AC012254.3-201ENST00000591183 2117 ntBASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 MIR132-201ENST00000591554 101 ntBASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 AL021918.2-201ENST00000613415 194 ntBASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 AC239868.2-201ENST00000564237 4527 ntBASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NPIPA2E9PIF3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms