Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SUGT1P3-202ENST00000604259 383 ntBASIC8.32□□□□□ -1.08
HFM1A2PYH4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
HFM1A2PYH4 AF117829.2-201ENST00000619538 361 ntBASIC8.32□□□□□ -1.08
HFM1A2PYH4 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC8.32□□□□□ -1.08
HFM1A2PYH4 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
HFM1A2PYH4 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
HFM1A2PYH4 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HFM1A2PYH4 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC8.32□□□□□ -1.08
HFM1A2PYH4 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HFM1A2PYH4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
HFM1A2PYH4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC8.32□□□□□ -1.08
HFM1A2PYH4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC8.32□□□□□ -1.08
HFM1A2PYH4 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HFM1A2PYH4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HFM1A2PYH4 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HFM1A2PYH4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HFM1A2PYH4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HFM1A2PYH4 MIR133B-201ENST00000362210 119 ntBASIC8.31□□□□□ -1.08
HFM1A2PYH4 SNORA74A-201ENST00000364089 198 ntBASIC8.31□□□□□ -1.08
HFM1A2PYH4 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 NANOGP4-201ENST00000427230 913 ntBASIC8.31□□□□□ -1.08
HFM1A2PYH4 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 TMEM183AP1-205ENST00000432739 290 ntBASIC8.31□□□□□ -1.08
HFM1A2PYH4 CFL1P1-202ENST00000432948 411 ntBASIC8.31□□□□□ -1.08
HFM1A2PYH4 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 H3F3BP1-201ENST00000440551 403 ntBASIC8.31□□□□□ -1.08
HFM1A2PYH4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 RN7SKP67-201ENST00000515905 235 ntBASIC8.31□□□□□ -1.08
HFM1A2PYH4 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 AC044860.2-201ENST00000561005 179 ntBASIC8.31□□□□□ -1.08
HFM1A2PYH4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
HFM1A2PYH4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HFM1A2PYH4 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HFM1A2PYH4 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.31□□□□□ -1.08
HFM1A2PYH4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HFM1A2PYH4 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HFM1A2PYH4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
HFM1A2PYH4 AC007342.5-201ENST00000571340 2142 ntBASIC8.3□□□□□ -1.08
HFM1A2PYH4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
HFM1A2PYH4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
HFM1A2PYH4 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC8.3□□□□□ -1.08
HFM1A2PYH4 RNU1-19P-201ENST00000363306 165 ntBASIC8.3□□□□□ -1.08
HFM1A2PYH4 AC096921.1-201ENST00000411661 375 ntBASIC8.3□□□□□ -1.08
HFM1A2PYH4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC8.3□□□□□ -1.08
HFM1A2PYH4 RPL23AP18-201ENST00000416139 468 ntBASIC8.3□□□□□ -1.08
HFM1A2PYH4 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
HFM1A2PYH4 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC8.3□□□□□ -1.08
HFM1A2PYH4 RPS26P41-201ENST00000450370 284 ntBASIC8.3□□□□□ -1.08
HFM1A2PYH4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC8.3□□□□□ -1.08
HFM1A2PYH4 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC8.3□□□□□ -1.08
HFM1A2PYH4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC8.3□□□□□ -1.08
HFM1A2PYH4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC8.3□□□□□ -1.08
HFM1A2PYH4 MIR1269B-201ENST00000580405 75 ntBASIC8.3□□□□□ -1.08
HFM1A2PYH4 AC009237.13-201ENST00000603193 276 ntBASIC8.3□□□□□ -1.08
HFM1A2PYH4 AC000068.2-201ENST00000608816 460 ntBASIC8.3□□□□□ -1.08
HFM1A2PYH4 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HFM1A2PYH4 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
HFM1A2PYH4 PABPC1P6-201ENST00000445594 1829 ntBASIC8.3□□□□□ -1.08
HFM1A2PYH4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HFM1A2PYH4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
HFM1A2PYH4 EEF1A1P30-201ENST00000429708 1315 ntBASIC8.3□□□□□ -1.08
HFM1A2PYH4 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HFM1A2PYH4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
HFM1A2PYH4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HFM1A2PYH4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC8.3□□□□□ -1.08
HFM1A2PYH4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HFM1A2PYH4 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
HFM1A2PYH4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HFM1A2PYH4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 U3.10-201ENST00000364459 214 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 AP000534.2-201ENST00000412729 568 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 RPSAP35-201ENST00000413753 818 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 RN7SL610P-201ENST00000463845 291 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 AC021106.1-201ENST00000509020 1058 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HFM1A2PYH4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 CDC42EP3P1-201ENST00000601004 764 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC8.29□□□□□ -1.08
HFM1A2PYH4 AC118658.2-201ENST00000618697 459 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
HFM1A2PYH4 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
HFM1A2PYH4 KYNUP3-201ENST00000574386 1341 ntBASIC8.29□□□□□ -1.08
HFM1A2PYH4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms