Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RPL35AP31-201ENST00000418340 337 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 CDY8P-201ENST00000428380 1279 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AL691517.1-201ENST00000440833 1235 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 CDY20P-201ENST00000447528 1279 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AC005077.1-201ENST00000449226 375 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 OR6C72P-201ENST00000451403 892 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AC119751.4-201ENST00000507498 357 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AC106872.4-201ENST00000510050 523 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AC025768.1-201ENST00000510057 267 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 OR5H7P-201ENST00000514084 930 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 SCARNA18.1-201ENST00000516330 83 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 IGKV2-19-201ENST00000518132 283 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AC134349.2-201ENST00000535136 910 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AP001858.2-201ENST00000536213 601 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 BNIP3P40-201ENST00000596017 556 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 OR4H6P-202ENST00000603819 340 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AL008723.3-201ENST00000608926 449 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AL391834.1-201ENST00000609609 560 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 BX323046.1-201ENST00000610145 535 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AC105235.1-201ENST00000623208 1816 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AC073488.3-201ENST00000631611 778 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 AP001153.1-201ENST00000641024 338 ntBASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSX2IPQ9Y2D8 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AP001002.1-201ENST00000625148 1513 ntBASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 CDY17P-201ENST00000414121 1282 ntBASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AL445528.1-201ENST00000426330 420 ntBASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AL391987.1-201ENST00000441025 200 ntBASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AC073109.1-201ENST00000445066 978 ntBASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 RANP2-201ENST00000456833 229 ntBASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AC007998.1-201ENST00000474156 672 ntBASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AC104997.1-201ENST00000519761 717 ntBASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AP000894.4-201ENST00000610185 483 ntBASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AC127024.6-201ENST00000621598 424 ntBASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 AL137141.1-201ENST00000624622 4836 ntBASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 THAP12P8-201ENST00000447914 2115 ntBASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX2IPQ9Y2D8 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms