Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AC004386.1-201ENST00000393214 761 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AC096921.1-201ENST00000411661 375 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AL158827.1-201ENST00000416300 391 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AK4P4-201ENST00000419465 646 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AC138761.5-201ENST00000433967 325 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AC099670.2-201ENST00000435130 321 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 RPS23P9-201ENST00000448848 438 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 CTSLP6-201ENST00000458273 1002 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AC025458.1-201ENST00000506046 166 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 Vault.2-201ENST00000516519 98 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 SCARNA6.1-201ENST00000516989 238 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AC021678.3-201ENST00000517893 476 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AC009779.8-202ENST00000607990 932 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AC022919.1-201ENST00000624979 626 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 CAP1P2-201ENST00000417455 1409 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 HSPD1P7-201ENST00000447985 1686 ntBASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 AL049634.1-201ENST00000453770 1720 ntBASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 TMSB4XP2-201ENST00000335179 210 ntBASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 AL159987.1-201ENST00000347911 293 ntBASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 AL121886.1-201ENST00000358609 435 ntBASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 RN7SKP185-201ENST00000362813 326 ntBASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 SUGT1P2-201ENST00000379452 992 ntBASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 BX276092.6-201ENST00000430476 250 ntBASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 TMEM183AP1-205ENST00000432739 290 ntBASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 BX276092.8-201ENST00000455722 250 ntBASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 Z83838.1-202ENST00000456225 839 ntBASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 CR383656.1-201ENST00000484916 377 ntBASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 RPL32P33-201ENST00000487023 394 ntBASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 AC073610.1-201ENST00000489971 396 ntBASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 AC009120.1-201ENST00000493458 473 ntBASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 MIR7109-201ENST00000613748 65 ntBASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 AC006600.2-201ENST00000624834 2506 ntBASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS29Q9UBQ0 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 OR4F13P-202ENST00000560066 2054 ntBASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 WDR95P-201ENST00000425638 1542 ntBASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AC005042.1-201ENST00000393397 800 ntBASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 MIR1203-201ENST00000408812 85 ntBASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AL035660.1-201ENST00000422041 222 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms