Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RN7SKP67-201ENST00000515905 235 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 RN7SKP253-201ENST00000516424 309 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC084337.1-201ENST00000524809 686 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 UBTFL10-201ENST00000528532 562 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 MRPS36P5-201ENST00000551909 298 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC106785.4-201ENST00000569492 412 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC036176.3-201ENST00000602456 418 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC004908.1-201ENST00000606572 541 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AL355493.4-201ENST00000618530 292 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC241377.1-201ENST00000619797 406 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC211486.4-201ENST00000621495 113 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC011330.2-201ENST00000621680 635 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC026108.1-201ENST00000635444 547 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC139713.2-210ENST00000641741 992 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AL359263.1-201ENST00000441188 2796 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 RNA5SP114-201ENST00000363780 113 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 RN7SKP269-201ENST00000365545 319 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 RNU1-46P-201ENST00000384425 164 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 RNU6-932P-201ENST00000391108 106 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AL157698.1-201ENST00000415190 1011 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 LINC01347-201ENST00000417964 355 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AL449283.1-202ENST00000418249 604 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 PRUNEP1-201ENST00000425846 705 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 YWHAZP2-201ENST00000440317 728 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 HSFY3P-201ENST00000444242 1191 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 TRY2P-201ENST00000448860 689 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 NPM1P9-201ENST00000453156 844 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 HSPE1P22-201ENST00000456856 327 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 RPSAP48-201ENST00000466509 889 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 MTCO3P35-201ENST00000485582 781 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AC093752.1-206ENST00000511823 336 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 RNA5SP473-201ENST00000516402 125 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 RN7SKP70-201ENST00000516655 271 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms