Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC007346.1-201ENST00000569208 867 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC020916.2-201ENST00000591242 360 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC092266.1-201ENST00000610958 165 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 LINC02495-203ENST00000636704 242 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 GVINP1-202ENST00000531871 7271 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC011416.1-201ENST00000514947 1732 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM4Q9C037 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM4Q9C037 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC004076.2-201ENST00000620532 3323 ntBASIC6□□□□□ -1.45
TRIM4Q9C037 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
TRIM4Q9C037 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM4Q9C037 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM4Q9C037 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6□□□□□ -1.45
TRIM4Q9C037 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6□□□□□ -1.45
TRIM4Q9C037 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM4Q9C037 RNA5SP350-201ENST00000363298 111 ntBASIC6□□□□□ -1.45
TRIM4Q9C037 EI24P3-201ENST00000399046 1062 ntBASIC6□□□□□ -1.45
TRIM4Q9C037 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
TRIM4Q9C037 Y_RNA.625-201ENST00000411256 107 ntBASIC6□□□□□ -1.45
TRIM4Q9C037 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM4Q9C037 ATP5LP2-201ENST00000440646 311 ntBASIC6□□□□□ -1.45
TRIM4Q9C037 RPL36AP39-201ENST00000445859 318 ntBASIC6□□□□□ -1.45
TRIM4Q9C037 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6□□□□□ -1.45
TRIM4Q9C037 AC023194.2-201ENST00000465398 406 ntBASIC6□□□□□ -1.45
TRIM4Q9C037 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6□□□□□ -1.45
TRIM4Q9C037 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM4Q9C037 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6□□□□□ -1.45
TRIM4Q9C037 LSM3P4-201ENST00000502948 309 ntBASIC6□□□□□ -1.45
TRIM4Q9C037 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6□□□□□ -1.45
TRIM4Q9C037 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6□□□□□ -1.45
TRIM4Q9C037 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6□□□□□ -1.45
TRIM4Q9C037 AC007225.2-201ENST00000562529 256 ntBASIC6□□□□□ -1.45
TRIM4Q9C037 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6□□□□□ -1.45
TRIM4Q9C037 SNORD95-201ENST00000579879 68 ntBASIC6□□□□□ -1.45
TRIM4Q9C037 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6□□□□□ -1.45
TRIM4Q9C037 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6□□□□□ -1.45
TRIM4Q9C037 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6□□□□□ -1.45
TRIM4Q9C037 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6□□□□□ -1.45
TRIM4Q9C037 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6□□□□□ -1.45
TRIM4Q9C037 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6□□□□□ -1.45
TRIM4Q9C037 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6□□□□□ -1.45
TRIM4Q9C037 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM4Q9C037 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6□□□□□ -1.45
TRIM4Q9C037 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM4Q9C037 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM4Q9C037 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6□□□□□ -1.45
TRIM4Q9C037 AL136984.1-201ENST00000607611 1893 ntBASIC6□□□□□ -1.45
TRIM4Q9C037 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM4Q9C037 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM4Q9C037 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM4Q9C037 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
TRIM4Q9C037 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM4Q9C037 AC092692.1-201ENST00000623625 2595 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 USP9YP3-201ENST00000434481 1766 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 RNF19BPY-201ENST00000458209 1550 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM4Q9C037 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TRIM4Q9C037 SUGT1P2-201ENST00000379452 992 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 SNORA51.9-201ENST00000384295 124 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 AC007394.1-201ENST00000421941 531 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM4Q9C037 OR2L9P-201ENST00000444456 913 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM4Q9C037 PPIAP27-201ENST00000453800 265 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM4Q9C037 RN7SL273P-201ENST00000481561 299 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM4Q9C037 RPL12P30-201ENST00000488389 499 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM4Q9C037 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM4Q9C037 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM4Q9C037 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM4Q9C037 OR5H7P-201ENST00000514084 930 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 RN7SKP238-201ENST00000516483 249 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 IGKV3D-25-201ENST00000519599 235 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 GTF2IP11-201ENST00000526931 420 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 TPRX1P1-201ENST00000557620 319 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM4Q9C037 MIR1273E-201ENST00000581165 102 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 SETP3-201ENST00000581726 813 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM4Q9C037 AC026898.1-201ENST00000586404 571 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM4Q9C037 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM4Q9C037 FAM72A-208ENST00000607379 1139 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms