Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MIR2117-201ENST00000516780 80 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 AP001284.1-201ENST00000528393 2118 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 AC090826.1-203ENST00000569235 490 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 AC079315.1-201ENST00000602952 623 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 AL133481.2-203ENST00000607558 139 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 AC108673.3-201ENST00000609183 335 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 MIR6809-201ENST00000612189 116 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 AC024884.1-201ENST00000620583 399 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 AC129778.1-202ENST00000623812 261 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 AC005618.4-201ENST00000625053 554 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 AL591379.1-207ENST00000635982 261 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL21A1Q96P44 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL21A1Q96P44 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL21A1Q96P44 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL21A1Q96P44 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL21A1Q96P44 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL21A1Q96P44 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL21A1Q96P44 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL21A1Q96P44 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.48□□□□□ -1.53
COL21A1Q96P44 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL21A1Q96P44 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.48□□□□□ -1.53
COL21A1Q96P44 AP005435.3-201ENST00000531260 3198 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.48□□□□□ -1.53
COL21A1Q96P44 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL21A1Q96P44 SELENOWP1-201ENST00000322792 252 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
COL21A1Q96P44 AL096711.1-201ENST00000404780 554 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 AC115283.1-201ENST00000427353 400 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 NPM1P25-201ENST00000429734 854 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 AC138761.5-201ENST00000433967 325 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 NPM1P18-201ENST00000434232 732 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 AL445928.1-201ENST00000435545 222 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 FRG2FP-204ENST00000453982 852 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 GEMIN2P1-201ENST00000454246 752 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 RPL12P39-201ENST00000455456 496 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.48□□□□□ -1.53
COL21A1Q96P44 AC025458.1-201ENST00000506046 166 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 LDHBP3-201ENST00000514909 822 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.48□□□□□ -1.53
COL21A1Q96P44 AC009962.1-201ENST00000567327 3813 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 LINC00556-201ENST00000569603 412 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 MIR4776-2-201ENST00000580204 80 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.48□□□□□ -1.53
COL21A1Q96P44 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.48□□□□□ -1.53
COL21A1Q96P44 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.48□□□□□ -1.53
COL21A1Q96P44 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.48□□□□□ -1.53
COL21A1Q96P44 AL513327.3-201ENST00000602618 469 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.48□□□□□ -1.53
COL21A1Q96P44 MIR6793-201ENST00000612376 63 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
COL21A1Q96P44 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL21A1Q96P44 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.48□□□□□ -1.53
COL21A1Q96P44 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL21A1Q96P44 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.48□□□□□ -1.53
COL21A1Q96P44 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
COL21A1Q96P44 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL21A1Q96P44 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL21A1Q96P44 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL21A1Q96P44 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.48□□□□□ -1.53
COL21A1Q96P44 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL21A1Q96P44 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 AF287957.1-201ENST00000607368 1595 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL21A1Q96P44 AC011933.2-201ENST00000578539 2790 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL21A1Q96P44 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL21A1Q96P44 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL21A1Q96P44 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL21A1Q96P44 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL21A1Q96P44 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 AC016739.1-201ENST00000405359 345 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 RN7SKP240-201ENST00000410583 375 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 KIF4CP-201ENST00000422742 1279 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 SETP9-201ENST00000423837 832 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 CRIP1P1-201ENST00000427567 185 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 RPS12P17-201ENST00000438591 377 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 RN7SL193P-201ENST00000491708 276 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 OR5H7P-201ENST00000514084 930 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 IGKV2-4-201ENST00000523070 340 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 AC005363.1-201ENST00000530779 351 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms