Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HDDC3Q8N4P3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.04□□□□□ -1.44
HDDC3Q8N4P3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.04□□□□□ -1.44
HDDC3Q8N4P3 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
HDDC3Q8N4P3 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HDDC3Q8N4P3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HDDC3Q8N4P3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
HDDC3Q8N4P3 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.04□□□□□ -1.44
HDDC3Q8N4P3 AOX3P-204ENST00000491025 2107 ntBASIC6.04□□□□□ -1.44
HDDC3Q8N4P3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HDDC3Q8N4P3 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 AC092692.1-201ENST00000623625 2595 ntBASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 OR9K1P-201ENST00000326513 941 ntBASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 MIR375-201ENST00000362103 64 ntBASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 RNU1-150P-201ENST00000362491 162 ntBASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 RN7SKP128-201ENST00000364270 303 ntBASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 TRGV7-201ENST00000427089 353 ntBASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 AP000281.1-201ENST00000444036 316 ntBASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 SBDSP1-204ENST00000453858 737 ntBASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 RAB28P2-201ENST00000454299 641 ntBASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 AC112187.1-201ENST00000455837 479 ntBASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 RN7SL352P-201ENST00000466002 277 ntBASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 RPS23P1-201ENST00000491662 432 ntBASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 SNORA70.20-201ENST00000516848 126 ntBASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 BNIP3P32-201ENST00000600015 554 ntBASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 MIR193BHG-214ENST00000641765 509 ntBASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 CCAT2-201ENST00000630920 1752 ntBASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HDDC3Q8N4P3 AL662795.2-201ENST00000624252 3706 ntBASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 OR13C1P-202ENST00000641378 2919 ntBASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 AC233968.1-201ENST00000611212 1300 ntBASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 SELENOWP1-201ENST00000322792 252 ntBASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 FUNDC2P3-201ENST00000334716 533 ntBASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 AL451142.1-201ENST00000375867 775 ntBASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 AP003170.5-201ENST00000397185 335 ntBASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 NMD3P2-201ENST00000421815 761 ntBASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 PRUNEP1-201ENST00000425846 705 ntBASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 AC073072.2-201ENST00000447425 348 ntBASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 AC016687.1-201ENST00000482574 353 ntBASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 AC008410.1-201ENST00000483777 339 ntBASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 RN7SL57P-201ENST00000493687 290 ntBASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 AC008629.2-201ENST00000503783 483 ntBASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.02□□□□□ -1.45
HDDC3Q8N4P3 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms