Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MIR7973-1-201ENST00000614683 76 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AP003400.3-201ENST00000624904 346 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AC026634.1-201ENST00000634369 198 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AL133243.4-201ENST00000623116 3109 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AL161912.4-201ENST00000623889 2468 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 RARSP1-201ENST00000542842 1418 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 SAG-201ENST00000409110 1591 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC010680.2-201ENST00000603521 2117 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 OR4K15-201ENST00000305051 1216 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 RN7SKP25-201ENST00000362449 308 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 Y_RNA.97-201ENST00000363094 102 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 MIR506-201ENST00000384998 124 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 GSTA9P-201ENST00000406231 611 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 MIR1184-2-201ENST00000408263 99 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 MIR1184-1-201ENST00000408606 99 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 MIR1184-3-201ENST00000408676 99 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 RN7SKP129-201ENST00000410288 299 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 RPL23AP19-201ENST00000436229 369 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 RABEPKP1-201ENST00000440529 1026 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 RPS4XP4-201ENST00000443195 763 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 FTH1P7-201ENST00000450676 552 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 SLC31A1P1-201ENST00000451221 567 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 NF1P3-201ENST00000457709 450 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 RPS27P23-201ENST00000487608 251 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 RPL23AP10-201ENST00000489946 466 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 GAPDHP22-201ENST00000491037 413 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC244505.1-201ENST00000502642 307 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 NDUFB4P2-201ENST00000509515 391 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 GAPDHP44-201ENST00000513513 1007 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC022878.1-201ENST00000530684 149 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC068587.4-201ENST00000533893 186 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AL157687.1-201ENST00000554853 619 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC092287.1-201ENST00000565782 463 ntTSL 3 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC137800.2-201ENST00000574375 120 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC063977.5-201ENST00000601044 974 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 CASC15-205ENST00000606336 1288 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC008250.2-201ENST00000615261 205 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC005383.1-201ENST00000622689 534 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AL359697.1-201ENST00000624879 587 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AL121594.6-201ENST00000633440 261 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 IFIT1P1-201ENST00000400497 1449 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms