Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 OR9G2P-201ENST00000533326 880 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC074029.1-201ENST00000552531 1044 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC006530.1-201ENST00000555980 571 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 ZNF519P2-201ENST00000557032 169 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 NDUFA3P4-201ENST00000560814 250 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 RPSAP66-201ENST00000592196 606 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC006116.6-201ENST00000593258 1103 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 FXYD6P1-201ENST00000604857 285 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AL390208.1-201ENST00000605885 644 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC107075.1-201ENST00000613695 314 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC009159.1-201ENST00000618386 642 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC015871.5-202ENST00000623252 701 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC073488.7-201ENST00000633785 778 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AL034408.1-201ENST00000637712 664 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC010132.4-201ENST00000569883 1368 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AL137100.1-201ENST00000556703 1620 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AL359922.2-201ENST00000581788 3017 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 SPATA31C2-201ENST00000324915 3777 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 NACA3P-201ENST00000359690 648 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 RNU6-252P-201ENST00000363232 107 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 RNU6-1042P-201ENST00000384204 107 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 MTCO1P56-201ENST00000401674 224 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 UBTFL2-201ENST00000411859 1191 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AF228730.4-201ENST00000421457 183 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 UQCRHP1-204ENST00000424609 274 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC009303.1-201ENST00000426307 352 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 RPL14P5-201ENST00000436474 730 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC239800.1-201ENST00000442049 719 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 RPSAP7-201ENST00000456871 885 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 RPL7P1-201ENST00000468161 747 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 RPL7P9-201ENST00000468715 747 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 RPS10P20-201ENST00000494130 463 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC091951.2-201ENST00000500762 203 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 NENFP3-201ENST00000503735 313 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 CHCHD2P7-201ENST00000508008 452 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC016559.1-201ENST00000511420 199 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 MAST4-IT1-201ENST00000514241 658 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 RN7SKP242-201ENST00000515967 289 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms