Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 AP002512.4-202ENST00000641599 4530 ntBASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 TMSB4XP4-201ENST00000323496 618 ntBASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 U3.10-201ENST00000364459 214 ntBASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 RN7SKP292-201ENST00000365522 317 ntBASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 EEF1B2P8-201ENST00000414101 671 ntBASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 OR5W1P-201ENST00000423705 938 ntBASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 AC023141.8-201ENST00000442554 208 ntBASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 RPL31P15-201ENST00000449770 338 ntBASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 GTF2IP11-201ENST00000526931 420 ntBASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 HMGN2P36-201ENST00000529541 409 ntBASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 AC079600.1-201ENST00000550326 297 ntBASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 OOSP1P2-201ENST00000579644 351 ntBASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 AC015802.2-201ENST00000589690 189 ntBASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 AC018628.1-201ENST00000624147 3819 ntBASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 AC015689.2-201ENST00000528172 1738 ntBASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 AC093671.1-201ENST00000624981 2929 ntBASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 KARSP1-201ENST00000451871 1752 ntBASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 OR7E101P-201ENST00000400428 513 ntBASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 BX119321.1-201ENST00000428912 797 ntBASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 AL445665.1-202ENST00000452436 324 ntBASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 OSTCP1-201ENST00000455507 450 ntBASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 AC099521.1-201ENST00000482557 334 ntBASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 PPIAP19-201ENST00000486414 492 ntBASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 RPL7P51-201ENST00000490532 749 ntBASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 MIR2117-201ENST00000516780 80 ntBASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 SNORA70.20-201ENST00000516848 126 ntBASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 OR4A42P-201ENST00000531397 938 ntBASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 AC135626.1-201ENST00000556983 435 ntBASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 MAPK10-350ENST00000641777 965 ntBASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 AC130304.1-201ENST00000622942 2385 ntBASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 ADAM24P-201ENST00000398655 2101 ntBASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 MFSD8-219ENST00000641228 2559 ntBASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFWD3Q6PCD5 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFWD3Q6PCD5 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFWD3Q6PCD5 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFWD3Q6PCD5 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFWD3Q6PCD5 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFWD3Q6PCD5 AC004076.2-201ENST00000620532 3323 ntBASIC6.03□□□□□ -1.44
RFWD3Q6PCD5 AL355488.2-201ENST00000609909 2850 ntBASIC6.03□□□□□ -1.44
RFWD3Q6PCD5 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms