Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 AP005403.1-201ENST00000579720 229 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 HIRAP1-201ENST00000605318 787 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 HSPD1P8-201ENST00000400121 1658 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 HSPD1P7-201ENST00000447985 1686 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 OLMALINC-203ENST00000641087 3779 ntBASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 SNORA17.1-201ENST00000362945 126 ntBASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 USP24P1-201ENST00000433802 779 ntBASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 PMS2P3-207ENST00000529061 717 ntBASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 FAM25E-202ENST00000608562 189 ntBASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 CCL14-204ENST00000622526 472 ntTSL 3 BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42BPAQ5VT25 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 PANDAR-201ENST00000629595 1506 ntBASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 RNA5SP305-201ENST00000362665 119 ntBASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 EI24P4-201ENST00000423683 1078 ntBASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 CEACAMP7-201ENST00000444105 496 ntBASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 AC109462.1-201ENST00000491087 368 ntBASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 AC137627.1-201ENST00000545761 289 ntBASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 AC006058.1-201ENST00000568686 5067 ntBASIC8.35□□□□□ -1.07
CDC42BPAQ5VT25 SNORD1C-201ENST00000363315 78 ntBASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 RN7SKP6-201ENST00000364795 319 ntBASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 AC023818.1-201ENST00000498379 384 ntBASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 AC100827.5-201ENST00000615883 426 ntBASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 WBP1LP8-201ENST00000617401 327 ntBASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 MIR6810-201ENST00000622701 70 ntBASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 AC079753.1-201ENST00000623243 3868 ntBASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 AC140479.2-201ENST00000421567 3130 ntBASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 RN7SKP126-201ENST00000411143 300 ntBASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 RSU1P1-201ENST00000453416 441 ntBASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 AC021106.1-201ENST00000509020 1058 ntBASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 TEK-204ENST00000519097 3836 ntTSL 2 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 OR5AM1P-201ENST00000532136 1032 ntBASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC8.34□□□□□ -1.07
CDC42BPAQ5VT25 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms