Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6□□□□□ -1.45
PTPN20Q4JDL3 MRE11P1-201ENST00000464884 2127 ntBASIC6□□□□□ -1.45
PTPN20Q4JDL3 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTPN20Q4JDL3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6□□□□□ -1.45
PTPN20Q4JDL3 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6□□□□□ -1.45
PTPN20Q4JDL3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6□□□□□ -1.45
PTPN20Q4JDL3 AC137627.1-201ENST00000545761 289 ntBASIC6□□□□□ -1.45
PTPN20Q4JDL3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6□□□□□ -1.45
PTPN20Q4JDL3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6□□□□□ -1.45
PTPN20Q4JDL3 AGGF1P7-201ENST00000562369 913 ntBASIC6□□□□□ -1.45
PTPN20Q4JDL3 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6□□□□□ -1.45
PTPN20Q4JDL3 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6□□□□□ -1.45
PTPN20Q4JDL3 AC100767.2-201ENST00000604840 693 ntBASIC6□□□□□ -1.45
PTPN20Q4JDL3 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6□□□□□ -1.45
PTPN20Q4JDL3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PTPN20Q4JDL3 AL591135.1-201ENST00000401578 5914 ntBASIC6□□□□□ -1.45
PTPN20Q4JDL3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6□□□□□ -1.45
PTPN20Q4JDL3 EEF1A1P33-201ENST00000554413 1362 ntBASIC6□□□□□ -1.45
PTPN20Q4JDL3 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
PTPN20Q4JDL3 AC093297.3-201ENST00000607056 2517 ntBASIC6□□□□□ -1.45
PTPN20Q4JDL3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6□□□□□ -1.45
PTPN20Q4JDL3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6□□□□□ -1.45
PTPN20Q4JDL3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
PTPN20Q4JDL3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PTPN20Q4JDL3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6□□□□□ -1.45
PTPN20Q4JDL3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 AL161912.4-201ENST00000623889 2468 ntBASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 AC087752.1-201ENST00000391360 558 ntBASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 HMGB1P20-201ENST00000402555 677 ntBASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 KATNBL1P2-201ENST00000433311 835 ntBASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 RPS23P9-201ENST00000448848 438 ntBASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 AC094085.1-201ENST00000468914 584 ntBASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 RPS3AP15-201ENST00000483874 781 ntBASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 IGLV3-24-201ENST00000517477 197 ntBASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 MRPS16P1-201ENST00000523462 412 ntBASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 HMGB1P42-201ENST00000532126 553 ntBASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 AC090607.5-201ENST00000615692 224 ntBASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 AC005899.7-201ENST00000618199 588 ntBASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 AC087565.3-203ENST00000641018 837 ntBASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 AC106872.5-201ENST00000508856 1416 ntBASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN20Q4JDL3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 AC239868.2-201ENST00000564237 4527 ntBASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 RNA5SP394-201ENST00000364216 119 ntBASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 AC005042.1-201ENST00000393397 800 ntBASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 RPS3AP2-201ENST00000407190 754 ntBASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 RN7SKP17-201ENST00000411242 351 ntBASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 RPS6P23-201ENST00000413224 722 ntBASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 IPPKP1-201ENST00000422501 768 ntBASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 AC090058.1-201ENST00000498788 435 ntBASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 DUTP7-201ENST00000507982 486 ntBASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 AC090888.3-201ENST00000558917 509 ntBASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 AL353729.2-201ENST00000605859 1249 ntBASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 MIR6778-201ENST00000617912 73 ntBASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.98□□□□□ -1.45
PTPN20Q4JDL3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms