Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC5.5□□□□□ -1.53
CACNA1BQ00975 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CACNA1BQ00975 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CACNA1BQ00975 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.5□□□□□ -1.53
CACNA1BQ00975 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.5□□□□□ -1.53
CACNA1BQ00975 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CACNA1BQ00975 CHMP1B2P-201ENST00000399581 597 ntBASIC5.5□□□□□ -1.53
CACNA1BQ00975 SNORA11.1-201ENST00000408133 129 ntBASIC5.5□□□□□ -1.53
CACNA1BQ00975 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.5□□□□□ -1.53
CACNA1BQ00975 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.5□□□□□ -1.53
CACNA1BQ00975 AC092570.3-201ENST00000420113 693 ntBASIC5.5□□□□□ -1.53
CACNA1BQ00975 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CACNA1BQ00975 AC234779.1-201ENST00000425910 285 ntBASIC5.5□□□□□ -1.53
CACNA1BQ00975 AC245047.1-201ENST00000433276 873 ntBASIC5.5□□□□□ -1.53
CACNA1BQ00975 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.5□□□□□ -1.53
CACNA1BQ00975 SNORA84-201ENST00000459229 133 ntBASIC5.5□□□□□ -1.53
CACNA1BQ00975 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CACNA1BQ00975 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.5□□□□□ -1.53
CACNA1BQ00975 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.5□□□□□ -1.53
CACNA1BQ00975 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.5□□□□□ -1.53
CACNA1BQ00975 AC078899.1-201ENST00000521432 1185 ntBASIC5.5□□□□□ -1.53
CACNA1BQ00975 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.5□□□□□ -1.53
CACNA1BQ00975 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.5□□□□□ -1.53
CACNA1BQ00975 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CACNA1BQ00975 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CACNA1BQ00975 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CACNA1BQ00975 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CACNA1BQ00975 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CACNA1BQ00975 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CACNA1BQ00975 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CACNA1BQ00975 SALL4P7-201ENST00000555779 3120 ntBASIC5.5□□□□□ -1.53
CACNA1BQ00975 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.5□□□□□ -1.53
CACNA1BQ00975 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CACNA1BQ00975 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CACNA1BQ00975 RN7SKP145-201ENST00000363291 303 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 RNU6-525P-201ENST00000363685 104 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 RN7SKP166-201ENST00000410812 305 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 RN7SKP263-201ENST00000411194 309 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 AL096829.1-201ENST00000413677 457 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 OR52B5P-201ENST00000435337 951 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 AC090589.1-201ENST00000473109 362 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 MED28P5-201ENST00000528254 438 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 AC015720.2-201ENST00000567709 334 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 OR52B5P-202ENST00000641118 1110 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CACNA1BQ00975 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CACNA1BQ00975 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CACNA1BQ00975 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CACNA1BQ00975 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CACNA1BQ00975 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CACNA1BQ00975 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CACNA1BQ00975 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CACNA1BQ00975 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CACNA1BQ00975 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CACNA1BQ00975 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CACNA1BQ00975 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 CYCSP10-201ENST00000417973 294 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 AC093162.1-201ENST00000419682 124 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 AC005297.1-201ENST00000444765 862 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 AL034399.1-201ENST00000451535 380 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 AC006338.2-201ENST00000616864 791 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 AC011447.6-201ENST00000623510 2598 ntBASIC5.49□□□□□ -1.53
CACNA1BQ00975 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CACNA1BQ00975 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CACNA1BQ00975 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CACNA1BQ00975 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CACNA1BQ00975 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CACNA1BQ00975 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CACNA1BQ00975 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CACNA1BQ00975 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CACNA1BQ00975 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CACNA1BQ00975 OR9G4-201ENST00000302957 984 ntBASIC5.48□□□□□ -1.53
CACNA1BQ00975 RN7SKP77-201ENST00000363261 353 ntBASIC5.48□□□□□ -1.53
CACNA1BQ00975 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.48□□□□□ -1.53
CACNA1BQ00975 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.48□□□□□ -1.53
CACNA1BQ00975 AC013701.1-201ENST00000522657 465 ntBASIC5.48□□□□□ -1.53
CACNA1BQ00975 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.48□□□□□ -1.53
CACNA1BQ00975 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms