Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.87□□□□□ -1.47
CBX1P83916 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.87□□□□□ -1.47
CBX1P83916 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.87□□□□□ -1.47
CBX1P83916 AL513548.1-201ENST00000562904 1724 ntBASIC5.87□□□□□ -1.47
CBX1P83916 AC015813.6-201ENST00000624409 5808 ntBASIC5.87□□□□□ -1.47
CBX1P83916 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CBX1P83916 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CBX1P83916 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CBX1P83916 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.86□□□□□ -1.47
CBX1P83916 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CBX1P83916 AC012254.3-201ENST00000591183 2117 ntBASIC5.86□□□□□ -1.47
CBX1P83916 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CBX1P83916 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CBX1P83916 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CBX1P83916 AC004023.1-201ENST00000561473 1744 ntBASIC5.86□□□□□ -1.47
CBX1P83916 CDY11P-201ENST00000447168 1651 ntBASIC5.86□□□□□ -1.47
CBX1P83916 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.86□□□□□ -1.47
CBX1P83916 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CBX1P83916 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.86□□□□□ -1.47
CBX1P83916 MRPS6P2-201ENST00000381143 370 ntBASIC5.86□□□□□ -1.47
CBX1P83916 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CBX1P83916 HSPD1P12-201ENST00000429127 1069 ntBASIC5.86□□□□□ -1.47
CBX1P83916 RPS12P17-201ENST00000438591 377 ntBASIC5.86□□□□□ -1.47
CBX1P83916 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.86□□□□□ -1.47
CBX1P83916 RPS26P24-201ENST00000497656 331 ntBASIC5.86□□□□□ -1.47
CBX1P83916 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.86□□□□□ -1.47
CBX1P83916 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.86□□□□□ -1.47
CBX1P83916 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.86□□□□□ -1.47
CBX1P83916 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.86□□□□□ -1.47
CBX1P83916 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.86□□□□□ -1.47
CBX1P83916 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.86□□□□□ -1.47
CBX1P83916 MIR4800-201ENST00000537353 80 ntBASIC5.86□□□□□ -1.47
CBX1P83916 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.86□□□□□ -1.47
CBX1P83916 BNIP3P1-201ENST00000547295 580 ntBASIC5.86□□□□□ -1.47
CBX1P83916 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
CBX1P83916 WBP1LP11-201ENST00000586141 328 ntBASIC5.86□□□□□ -1.47
CBX1P83916 MIR6736-201ENST00000616799 59 ntBASIC5.86□□□□□ -1.47
CBX1P83916 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.86□□□□□ -1.47
CBX1P83916 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.86□□□□□ -1.47
CBX1P83916 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CBX1P83916 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
CBX1P83916 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CBX1P83916 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CBX1P83916 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CBX1P83916 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CBX1P83916 AC000123.3-201ENST00000624029 4975 ntBASIC5.85□□□□□ -1.47
CBX1P83916 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CBX1P83916 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CBX1P83916 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CBX1P83916 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
CBX1P83916 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CBX1P83916 AC017079.1-201ENST00000333650 415 ntBASIC5.85□□□□□ -1.47
CBX1P83916 RNU105B-201ENST00000364478 208 ntBASIC5.85□□□□□ -1.47
CBX1P83916 RN7SKP130-201ENST00000364924 301 ntBASIC5.85□□□□□ -1.47
CBX1P83916 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CBX1P83916 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CBX1P83916 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.85□□□□□ -1.47
CBX1P83916 RN7SKP121-201ENST00000410842 305 ntBASIC5.85□□□□□ -1.47
CBX1P83916 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.85□□□□□ -1.47
CBX1P83916 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC5.85□□□□□ -1.47
CBX1P83916 RPL19P16-201ENST00000433839 588 ntBASIC5.85□□□□□ -1.47
CBX1P83916 AL161722.1-201ENST00000446972 1032 ntBASIC5.85□□□□□ -1.47
CBX1P83916 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.85□□□□□ -1.47
CBX1P83916 MEMO1P4-201ENST00000453590 386 ntBASIC5.85□□□□□ -1.47
CBX1P83916 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.85□□□□□ -1.47
CBX1P83916 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.85□□□□□ -1.47
CBX1P83916 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.85□□□□□ -1.47
CBX1P83916 AP005902.2-201ENST00000518393 307 ntBASIC5.85□□□□□ -1.47
CBX1P83916 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.85□□□□□ -1.47
CBX1P83916 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CBX1P83916 AC122688.1-201ENST00000541494 223 ntBASIC5.85□□□□□ -1.47
CBX1P83916 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.85□□□□□ -1.47
CBX1P83916 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.85□□□□□ -1.47
CBX1P83916 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.85□□□□□ -1.47
CBX1P83916 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.85□□□□□ -1.47
CBX1P83916 AC026956.1-201ENST00000558741 396 ntBASIC5.85□□□□□ -1.47
CBX1P83916 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.85□□□□□ -1.47
CBX1P83916 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC5.85□□□□□ -1.47
CBX1P83916 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC5.85□□□□□ -1.47
CBX1P83916 RN7SL131P-201ENST00000579043 256 ntBASIC5.85□□□□□ -1.47
CBX1P83916 DHFRP1-201ENST00000579682 559 ntBASIC5.85□□□□□ -1.47
CBX1P83916 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.85□□□□□ -1.47
CBX1P83916 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.85□□□□□ -1.47
CBX1P83916 AC108738.1-201ENST00000603703 237 ntBASIC5.85□□□□□ -1.47
CBX1P83916 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.85□□□□□ -1.47
CBX1P83916 AL512413.1-201ENST00000606489 382 ntBASIC5.85□□□□□ -1.47
CBX1P83916 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.85□□□□□ -1.47
CBX1P83916 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.85□□□□□ -1.47
CBX1P83916 AL121985.3-201ENST00000620690 523 ntBASIC5.85□□□□□ -1.47
CBX1P83916 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CBX1P83916 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.85□□□□□ -1.47
CBX1P83916 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.85□□□□□ -1.47
CBX1P83916 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
CBX1P83916 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CBX1P83916 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
CBX1P83916 AC092701.1-201ENST00000623627 1551 ntBASIC5.84□□□□□ -1.47
CBX1P83916 CASC19-204ENST00000641001 2055 ntBASIC5.84□□□□□ -1.47
CBX1P83916 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CBX1P83916 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.84□□□□□ -1.47
CBX1P83916 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms