Protein–RNA interactions for Protein: P50461

CSRP3, Cysteine and glycine-rich protein 3, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP3P50461 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CSRP3P50461 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.8□□□□□ -1.48
CSRP3P50461 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CSRP3P50461 AC012254.3-201ENST00000591183 2117 ntBASIC5.8□□□□□ -1.48
CSRP3P50461 AC004076.2-201ENST00000620532 3323 ntBASIC5.8□□□□□ -1.48
CSRP3P50461 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CSRP3P50461 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.8□□□□□ -1.48
CSRP3P50461 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CSRP3P50461 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CSRP3P50461 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CSRP3P50461 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CSRP3P50461 RPL37P18-201ENST00000411602 243 ntBASIC5.8□□□□□ -1.48
CSRP3P50461 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.8□□□□□ -1.48
CSRP3P50461 AL354868.1-201ENST00000417077 482 ntBASIC5.8□□□□□ -1.48
CSRP3P50461 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.8□□□□□ -1.48
CSRP3P50461 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CSRP3P50461 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.8□□□□□ -1.48
CSRP3P50461 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.8□□□□□ -1.48
CSRP3P50461 DEFA9P-201ENST00000433042 285 ntBASIC5.8□□□□□ -1.48
CSRP3P50461 PTMAP6-201ENST00000439110 327 ntBASIC5.8□□□□□ -1.48
CSRP3P50461 GEMIN2P1-201ENST00000454246 752 ntBASIC5.8□□□□□ -1.48
CSRP3P50461 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.8□□□□□ -1.48
CSRP3P50461 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.8□□□□□ -1.48
CSRP3P50461 TXNP4-201ENST00000575018 310 ntBASIC5.8□□□□□ -1.48
CSRP3P50461 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.8□□□□□ -1.48
CSRP3P50461 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.8□□□□□ -1.48
CSRP3P50461 AC090236.2-201ENST00000587933 1101 ntBASIC5.8□□□□□ -1.48
CSRP3P50461 AC145423.1-201ENST00000605712 336 ntBASIC5.8□□□□□ -1.48
CSRP3P50461 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.8□□□□□ -1.48
CSRP3P50461 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.8□□□□□ -1.48
CSRP3P50461 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CSRP3P50461 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.8□□□□□ -1.48
CSRP3P50461 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CSRP3P50461 AC008627.1-201ENST00000517511 1704 ntBASIC5.79□□□□□ -1.48
CSRP3P50461 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
CSRP3P50461 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CSRP3P50461 PSG10P-201ENST00000501199 1500 ntBASIC5.79□□□□□ -1.48
CSRP3P50461 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CSRP3P50461 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CSRP3P50461 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CSRP3P50461 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CSRP3P50461 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.79□□□□□ -1.48
CSRP3P50461 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CSRP3P50461 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CSRP3P50461 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CSRP3P50461 RNA5SP453-201ENST00000362503 119 ntBASIC5.79□□□□□ -1.48
CSRP3P50461 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CSRP3P50461 RNU1-136P-201ENST00000384181 164 ntBASIC5.79□□□□□ -1.48
CSRP3P50461 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CSRP3P50461 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.79□□□□□ -1.48
CSRP3P50461 AL158827.1-201ENST00000416300 391 ntBASIC5.79□□□□□ -1.48
CSRP3P50461 TRGV5P-201ENST00000419915 354 ntBASIC5.79□□□□□ -1.48
CSRP3P50461 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.79□□□□□ -1.48
CSRP3P50461 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.79□□□□□ -1.48
CSRP3P50461 UBFD1P1-201ENST00000473259 814 ntBASIC5.79□□□□□ -1.48
CSRP3P50461 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.79□□□□□ -1.48
CSRP3P50461 RNA5SP438-201ENST00000516561 112 ntBASIC5.79□□□□□ -1.48
CSRP3P50461 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.79□□□□□ -1.48
CSRP3P50461 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.79□□□□□ -1.48
CSRP3P50461 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.79□□□□□ -1.48
CSRP3P50461 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.79□□□□□ -1.48
CSRP3P50461 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.79□□□□□ -1.48
CSRP3P50461 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.79□□□□□ -1.48
CSRP3P50461 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.79□□□□□ -1.48
CSRP3P50461 HIRAP1-201ENST00000605318 787 ntBASIC5.79□□□□□ -1.48
CSRP3P50461 NANOGP3-201ENST00000605855 286 ntBASIC5.79□□□□□ -1.48
CSRP3P50461 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.79□□□□□ -1.48
CSRP3P50461 AL035661.1-201ENST00000620459 1144 ntBASIC5.79□□□□□ -1.48
CSRP3P50461 AL136228.1-201ENST00000622221 319 ntBASIC5.79□□□□□ -1.48
CSRP3P50461 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CSRP3P50461 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CSRP3P50461 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CSRP3P50461 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CSRP3P50461 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CSRP3P50461 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.79□□□□□ -1.48
CSRP3P50461 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CSRP3P50461 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.79□□□□□ -1.48
CSRP3P50461 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CSRP3P50461 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CSRP3P50461 NR1H5P-201ENST00000452683 1377 ntBASIC5.79□□□□□ -1.48
CSRP3P50461 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
CSRP3P50461 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CSRP3P50461 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CSRP3P50461 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CSRP3P50461 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.78□□□□□ -1.48
CSRP3P50461 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.78□□□□□ -1.48
CSRP3P50461 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CSRP3P50461 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CSRP3P50461 AC114774.1-201ENST00000507410 1770 ntBASIC5.78□□□□□ -1.48
CSRP3P50461 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.78□□□□□ -1.48
CSRP3P50461 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CSRP3P50461 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CSRP3P50461 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CSRP3P50461 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CSRP3P50461 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CSRP3P50461 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CSRP3P50461 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CSRP3P50461 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.78□□□□□ -1.48
CSRP3P50461 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
CSRP3P50461 RPS3AP2-201ENST00000407190 754 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms