Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.46□□□□□ -1.54
SOX2P48431 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
SOX2P48431 AC008945.1-201ENST00000505144 499 ntBASIC5.46□□□□□ -1.54
SOX2P48431 MRPL57P6-201ENST00000506570 309 ntBASIC5.46□□□□□ -1.54
SOX2P48431 AC008868.1-201ENST00000509786 737 ntBASIC5.46□□□□□ -1.54
SOX2P48431 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX2P48431 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.46□□□□□ -1.54
SOX2P48431 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.46□□□□□ -1.54
SOX2P48431 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.46□□□□□ -1.54
SOX2P48431 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX2P48431 AC084824.2-201ENST00000548906 345 ntBASIC5.46□□□□□ -1.54
SOX2P48431 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX2P48431 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX2P48431 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX2P48431 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX2P48431 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX2P48431 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX2P48431 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX2P48431 MIR132-201ENST00000591554 101 ntBASIC5.46□□□□□ -1.54
SOX2P48431 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.46□□□□□ -1.54
SOX2P48431 BNIP3P32-201ENST00000600015 554 ntBASIC5.46□□□□□ -1.54
SOX2P48431 BMS1P7-201ENST00000602440 1052 ntBASIC5.46□□□□□ -1.54
SOX2P48431 AC004805.3-201ENST00000603178 310 ntBASIC5.46□□□□□ -1.54
SOX2P48431 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 MIR7159-201ENST00000620587 66 ntBASIC5.46□□□□□ -1.54
SOX2P48431 AC103564.3-201ENST00000621194 220 ntBASIC5.46□□□□□ -1.54
SOX2P48431 AC018558.4-201ENST00000622153 281 ntBASIC5.46□□□□□ -1.54
SOX2P48431 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX2P48431 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX2P48431 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SOX2P48431 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 SMG1P5-202ENST00000529428 4219 ntBASIC5.46□□□□□ -1.54
SOX2P48431 SMG1P2-201ENST00000566127 4221 ntBASIC5.46□□□□□ -1.54
SOX2P48431 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.46□□□□□ -1.54
SOX2P48431 AC005702.3-201ENST00000585345 1447 ntBASIC5.46□□□□□ -1.54
SOX2P48431 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX2P48431 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX2P48431 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX2P48431 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SOX2P48431 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
SOX2P48431 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.45□□□□□ -1.54
SOX2P48431 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SOX2P48431 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SOX2P48431 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX2P48431 AC234772.1-201ENST00000377927 937 ntBASIC5.45□□□□□ -1.54
SOX2P48431 AL096800.1-201ENST00000405326 893 ntBASIC5.45□□□□□ -1.54
SOX2P48431 NACAP7-201ENST00000407371 609 ntBASIC5.45□□□□□ -1.54
SOX2P48431 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX2P48431 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.45□□□□□ -1.54
SOX2P48431 BTF3P9-201ENST00000418784 283 ntBASIC5.45□□□□□ -1.54
SOX2P48431 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.45□□□□□ -1.54
SOX2P48431 AL139184.1-202ENST00000422303 222 ntBASIC5.45□□□□□ -1.54
SOX2P48431 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.45□□□□□ -1.54
SOX2P48431 AL160175.1-201ENST00000428124 247 ntBASIC5.45□□□□□ -1.54
SOX2P48431 BX119904.1-201ENST00000432026 348 ntBASIC5.45□□□□□ -1.54
SOX2P48431 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.45□□□□□ -1.54
SOX2P48431 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.45□□□□□ -1.54
SOX2P48431 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.45□□□□□ -1.54
SOX2P48431 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.45□□□□□ -1.54
SOX2P48431 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.45□□□□□ -1.54
SOX2P48431 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.45□□□□□ -1.54
SOX2P48431 ELOCP13-201ENST00000443934 329 ntBASIC5.45□□□□□ -1.54
SOX2P48431 MTND1P33-201ENST00000446251 917 ntBASIC5.45□□□□□ -1.54
SOX2P48431 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.45□□□□□ -1.54
SOX2P48431 RANP2-201ENST00000456833 229 ntBASIC5.45□□□□□ -1.54
SOX2P48431 RPS3AP49-201ENST00000472161 790 ntBASIC5.45□□□□□ -1.54
SOX2P48431 RPS10P28-201ENST00000480396 498 ntBASIC5.45□□□□□ -1.54
SOX2P48431 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.45□□□□□ -1.54
SOX2P48431 AL035690.1-201ENST00000490892 383 ntBASIC5.45□□□□□ -1.54
SOX2P48431 TPT1P3-201ENST00000492841 512 ntBASIC5.45□□□□□ -1.54
SOX2P48431 AL158068.1-201ENST00000506116 616 ntBASIC5.45□□□□□ -1.54
SOX2P48431 AC010343.2-201ENST00000510162 224 ntBASIC5.45□□□□□ -1.54
SOX2P48431 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX2P48431 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.45□□□□□ -1.54
SOX2P48431 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX2P48431 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.45□□□□□ -1.54
SOX2P48431 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.45□□□□□ -1.54
SOX2P48431 OR8G5-201ENST00000524943 1041 ntBASIC5.45□□□□□ -1.54
SOX2P48431 PSMC1P8-201ENST00000536820 1296 ntBASIC5.45□□□□□ -1.54
SOX2P48431 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.45□□□□□ -1.54
SOX2P48431 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX2P48431 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.45□□□□□ -1.54
SOX2P48431 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SOX2P48431 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.45□□□□□ -1.54
SOX2P48431 AC023310.2-201ENST00000553844 547 ntBASIC5.45□□□□□ -1.54
SOX2P48431 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.45□□□□□ -1.54
SOX2P48431 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.45□□□□□ -1.54
SOX2P48431 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.45□□□□□ -1.54
SOX2P48431 AC023825.1-201ENST00000566704 1030 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms